Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SNX27Q96L92 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.77■□□□□ 0.92
SNX27Q96L92 AC005363.2-201ENST00000618631 242 ntBASIC20.77■□□□□ 0.92
SNX27Q96L92 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.77■□□□□ 0.92
SNX27Q96L92 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNX27Q96L92 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.77■□□□□ 0.91
SNX27Q96L92 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SNX27Q96L92 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SNX27Q96L92 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SNX27Q96L92 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNX27Q96L92 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.76■□□□□ 0.91
SNX27Q96L92 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.76■□□□□ 0.91
SNX27Q96L92 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNX27Q96L92 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SNX27Q96L92 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.76■□□□□ 0.91
SNX27Q96L92 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.76■□□□□ 0.91
SNX27Q96L92 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.76■□□□□ 0.91
SNX27Q96L92 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.76■□□□□ 0.91
SNX27Q96L92 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SNX27Q96L92 KRT18P56-201ENST00000507275 550 ntBASIC20.76■□□□□ 0.91
SNX27Q96L92 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.76■□□□□ 0.91
SNX27Q96L92 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SNX27Q96L92 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SNX27Q96L92 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNX27Q96L92 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNX27Q96L92 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SNX27Q96L92 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.76■□□□□ 0.91
SNX27Q96L92 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNX27Q96L92 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNX27Q96L92 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNX27Q96L92 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNX27Q96L92 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
SNX27Q96L92 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.75■□□□□ 0.91
SNX27Q96L92 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SNX27Q96L92 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNX27Q96L92 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.75■□□□□ 0.91
SNX27Q96L92 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SNX27Q96L92 AC113347.1-201ENST00000413321 391 ntBASIC20.75■□□□□ 0.91
SNX27Q96L92 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNX27Q96L92 SLC25A3P1-201ENST00000443844 931 ntBASIC20.75■□□□□ 0.91
SNX27Q96L92 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.75■□□□□ 0.91
SNX27Q96L92 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.75■□□□□ 0.91
SNX27Q96L92 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.75■□□□□ 0.91
SNX27Q96L92 AC087388.1-201ENST00000571370 1112 ntBASIC20.75■□□□□ 0.91
SNX27Q96L92 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SNX27Q96L92 FAM87A-204ENST00000613235 858 ntBASIC20.75■□□□□ 0.91
SNX27Q96L92 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SNX27Q96L92 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
SNX27Q96L92 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SNX27Q96L92 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
SNX27Q96L92 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNX27Q96L92 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNX27Q96L92 AC073130.3-201ENST00000624389 2278 ntBASIC20.74■□□□□ 0.91
SNX27Q96L92 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNX27Q96L92 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SNX27Q96L92 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.74■□□□□ 0.91
SNX27Q96L92 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
SNX27Q96L92 SLC25A1P2-201ENST00000430693 912 ntBASIC20.74■□□□□ 0.91
SNX27Q96L92 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.74■□□□□ 0.91
SNX27Q96L92 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SNX27Q96L92 ECEL1P2-202ENST00000465689 757 ntBASIC20.74■□□□□ 0.91
SNX27Q96L92 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
SNX27Q96L92 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
SNX27Q96L92 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.74■□□□□ 0.91
SNX27Q96L92 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.74■□□□□ 0.91
SNX27Q96L92 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.74■□□□□ 0.91
SNX27Q96L92 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.74■□□□□ 0.91
SNX27Q96L92 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.74■□□□□ 0.91
SNX27Q96L92 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNX27Q96L92 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNX27Q96L92 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SNX27Q96L92 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNX27Q96L92 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.74■□□□□ 0.91
SNX27Q96L92 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNX27Q96L92 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNX27Q96L92 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNX27Q96L92 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.73■□□□□ 0.91
SNX27Q96L92 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SNX27Q96L92 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.73■□□□□ 0.91
SNX27Q96L92 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.73■□□□□ 0.91
SNX27Q96L92 AC005521.1-201ENST00000393351 872 ntBASIC20.73■□□□□ 0.91
SNX27Q96L92 TSPY23P-201ENST00000440136 739 ntBASIC20.73■□□□□ 0.91
SNX27Q96L92 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.73■□□□□ 0.91
SNX27Q96L92 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNX27Q96L92 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SNX27Q96L92 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
SNX27Q96L92 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.73■□□□□ 0.91
SNX27Q96L92 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNX27Q96L92 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNX27Q96L92 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SNX27Q96L92 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNX27Q96L92 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.73■□□□□ 0.91
SNX27Q96L92 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SNX27Q96L92 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNX27Q96L92 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SNX27Q96L92 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SNX27Q96L92 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNX27Q96L92 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNX27Q96L92 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNX27Q96L92 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms