Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
FOXRED1Q96CU9 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
FOXRED1Q96CU9 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
FOXRED1Q96CU9 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
FOXRED1Q96CU9 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
FOXRED1Q96CU9 HLA-L-209ENST00000420110 1011 ntBASIC16.71■□□□□ 0.27
FOXRED1Q96CU9 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.71■□□□□ 0.27
FOXRED1Q96CU9 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
FOXRED1Q96CU9 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.71■□□□□ 0.27
FOXRED1Q96CU9 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
FOXRED1Q96CU9 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.71■□□□□ 0.27
FOXRED1Q96CU9 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.71■□□□□ 0.27
FOXRED1Q96CU9 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
FOXRED1Q96CU9 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.71■□□□□ 0.27
FOXRED1Q96CU9 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.71■□□□□ 0.27
FOXRED1Q96CU9 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
FOXRED1Q96CU9 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
FOXRED1Q96CU9 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
FOXRED1Q96CU9 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.71■□□□□ 0.27
FOXRED1Q96CU9 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
FOXRED1Q96CU9 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
FOXRED1Q96CU9 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
FOXRED1Q96CU9 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.71■□□□□ 0.26
FOXRED1Q96CU9 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.26
FOXRED1Q96CU9 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
FOXRED1Q96CU9 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
FOXRED1Q96CU9 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
FOXRED1Q96CU9 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.26
FOXRED1Q96CU9 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXRED1Q96CU9 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.7■□□□□ 0.26
FOXRED1Q96CU9 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.7■□□□□ 0.26
FOXRED1Q96CU9 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FOXRED1Q96CU9 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
FOXRED1Q96CU9 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.7■□□□□ 0.26
FOXRED1Q96CU9 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXRED1Q96CU9 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXRED1Q96CU9 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.7■□□□□ 0.26
FOXRED1Q96CU9 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.7■□□□□ 0.26
FOXRED1Q96CU9 Z98044.1-201ENST00000632503 1764 ntBASIC16.7■□□□□ 0.26
FOXRED1Q96CU9 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.7■□□□□ 0.26
FOXRED1Q96CU9 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FOXRED1Q96CU9 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FOXRED1Q96CU9 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC16.7■□□□□ 0.26
FOXRED1Q96CU9 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXRED1Q96CU9 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.7■□□□□ 0.26
FOXRED1Q96CU9 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.7■□□□□ 0.26
FOXRED1Q96CU9 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.7■□□□□ 0.26
FOXRED1Q96CU9 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.7■□□□□ 0.26
FOXRED1Q96CU9 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.7■□□□□ 0.26
FOXRED1Q96CU9 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.7■□□□□ 0.26
FOXRED1Q96CU9 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
FOXRED1Q96CU9 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXRED1Q96CU9 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXRED1Q96CU9 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FOXRED1Q96CU9 MKRN4P-201ENST00000444706 1521 ntBASIC16.7■□□□□ 0.26
FOXRED1Q96CU9 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.7■□□□□ 0.26
FOXRED1Q96CU9 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXRED1Q96CU9 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.69■□□□□ 0.26
FOXRED1Q96CU9 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
FOXRED1Q96CU9 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXRED1Q96CU9 AC093525.10-201ENST00000625130 1569 ntBASIC16.69■□□□□ 0.26
FOXRED1Q96CU9 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
FOXRED1Q96CU9 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXRED1Q96CU9 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXRED1Q96CU9 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXRED1Q96CU9 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
FOXRED1Q96CU9 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
FOXRED1Q96CU9 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXRED1Q96CU9 AL390719.1-204ENST00000412397 1219 ntBASIC16.69■□□□□ 0.26
FOXRED1Q96CU9 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.69■□□□□ 0.26
FOXRED1Q96CU9 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
FOXRED1Q96CU9 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.69■□□□□ 0.26
FOXRED1Q96CU9 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
FOXRED1Q96CU9 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.69■□□□□ 0.26
FOXRED1Q96CU9 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.69■□□□□ 0.26
FOXRED1Q96CU9 AC104771.1-201ENST00000603335 964 ntBASIC16.69■□□□□ 0.26
FOXRED1Q96CU9 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXRED1Q96CU9 AL049812.1-201ENST00000432563 2267 ntBASIC16.69■□□□□ 0.26
FOXRED1Q96CU9 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXRED1Q96CU9 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
FOXRED1Q96CU9 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXRED1Q96CU9 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXRED1Q96CU9 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXRED1Q96CU9 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
FOXRED1Q96CU9 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXRED1Q96CU9 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXRED1Q96CU9 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
FOXRED1Q96CU9 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXRED1Q96CU9 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.69■□□□□ 0.26
FOXRED1Q96CU9 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.68■□□□□ 0.26
FOXRED1Q96CU9 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.68■□□□□ 0.26
FOXRED1Q96CU9 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXRED1Q96CU9 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
FOXRED1Q96CU9 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXRED1Q96CU9 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXRED1Q96CU9 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXRED1Q96CU9 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
FOXRED1Q96CU9 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FOXRED1Q96CU9 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.68■□□□□ 0.26
FOXRED1Q96CU9 LSM12P1-201ENST00000411836 588 ntBASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms