Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 AL355075.4-201ENST00000554988 638 ntBASIC17.05■□□□□ 0.32
APH1AQ96BI3 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.05■□□□□ 0.32
APH1AQ96BI3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
APH1AQ96BI3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.05■□□□□ 0.32
APH1AQ96BI3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.05■□□□□ 0.32
APH1AQ96BI3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.05■□□□□ 0.32
APH1AQ96BI3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.05■□□□□ 0.32
APH1AQ96BI3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.05■□□□□ 0.32
APH1AQ96BI3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APH1AQ96BI3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
APH1AQ96BI3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APH1AQ96BI3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APH1AQ96BI3 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
APH1AQ96BI3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
APH1AQ96BI3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APH1AQ96BI3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.04■□□□□ 0.32
APH1AQ96BI3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.04■□□□□ 0.32
APH1AQ96BI3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
APH1AQ96BI3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
APH1AQ96BI3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
APH1AQ96BI3 UNC93B2-201ENST00000285383 730 ntBASIC17.04■□□□□ 0.32
APH1AQ96BI3 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
APH1AQ96BI3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.04■□□□□ 0.32
APH1AQ96BI3 AC011506.1-201ENST00000474329 610 ntBASIC17.04■□□□□ 0.32
APH1AQ96BI3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
APH1AQ96BI3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.04■□□□□ 0.32
APH1AQ96BI3 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.04■□□□□ 0.32
APH1AQ96BI3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.04■□□□□ 0.32
APH1AQ96BI3 DGCR10-201ENST00000609839 495 ntBASIC17.04■□□□□ 0.32
APH1AQ96BI3 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APH1AQ96BI3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
APH1AQ96BI3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
APH1AQ96BI3 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APH1AQ96BI3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
APH1AQ96BI3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.04■□□□□ 0.32
APH1AQ96BI3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APH1AQ96BI3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
APH1AQ96BI3 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
APH1AQ96BI3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
APH1AQ96BI3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.03■□□□□ 0.32
APH1AQ96BI3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
APH1AQ96BI3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.03■□□□□ 0.32
APH1AQ96BI3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
APH1AQ96BI3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
APH1AQ96BI3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
APH1AQ96BI3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
APH1AQ96BI3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.03■□□□□ 0.32
APH1AQ96BI3 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.03■□□□□ 0.32
APH1AQ96BI3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APH1AQ96BI3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APH1AQ96BI3 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APH1AQ96BI3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
APH1AQ96BI3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APH1AQ96BI3 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
APH1AQ96BI3 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.03■□□□□ 0.32
APH1AQ96BI3 RBM17P1-201ENST00000453646 1190 ntBASIC17.03■□□□□ 0.32
APH1AQ96BI3 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.03■□□□□ 0.32
APH1AQ96BI3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.03■□□□□ 0.32
APH1AQ96BI3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.03■□□□□ 0.32
APH1AQ96BI3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.03■□□□□ 0.32
APH1AQ96BI3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
APH1AQ96BI3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APH1AQ96BI3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APH1AQ96BI3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APH1AQ96BI3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.03■□□□□ 0.32
APH1AQ96BI3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
APH1AQ96BI3 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.03■□□□□ 0.32
APH1AQ96BI3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APH1AQ96BI3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APH1AQ96BI3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.03■□□□□ 0.32
APH1AQ96BI3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APH1AQ96BI3 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
APH1AQ96BI3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
APH1AQ96BI3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
APH1AQ96BI3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
APH1AQ96BI3 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
APH1AQ96BI3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.02■□□□□ 0.32
APH1AQ96BI3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.02■□□□□ 0.32
APH1AQ96BI3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
APH1AQ96BI3 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
APH1AQ96BI3 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
APH1AQ96BI3 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
APH1AQ96BI3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.02■□□□□ 0.32
APH1AQ96BI3 MESTP1-201ENST00000404287 994 ntBASIC17.02■□□□□ 0.32
APH1AQ96BI3 FAM207BP-201ENST00000447172 505 ntBASIC17.02■□□□□ 0.32
APH1AQ96BI3 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.02■□□□□ 0.32
APH1AQ96BI3 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.02■□□□□ 0.32
APH1AQ96BI3 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.02■□□□□ 0.32
APH1AQ96BI3 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
APH1AQ96BI3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.02■□□□□ 0.32
APH1AQ96BI3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.02■□□□□ 0.32
APH1AQ96BI3 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.02■□□□□ 0.32
APH1AQ96BI3 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.02■□□□□ 0.32
APH1AQ96BI3 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.02■□□□□ 0.32
APH1AQ96BI3 AC130371.2-201ENST00000619443 611 ntBASIC17.02■□□□□ 0.32
APH1AQ96BI3 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.02■□□□□ 0.31
APH1AQ96BI3 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.02■□□□□ 0.31
APH1AQ96BI3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
APH1AQ96BI3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
APH1AQ96BI3 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms