Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 MIR6786-201ENST00000616843 113 ntBASIC20.2■□□□□ 0.82
RNF139Q8WU17 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF139Q8WU17 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.2■□□□□ 0.82
RNF139Q8WU17 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RNF139Q8WU17 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.2■□□□□ 0.82
RNF139Q8WU17 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.2■□□□□ 0.82
RNF139Q8WU17 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
RNF139Q8WU17 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.2■□□□□ 0.82
RNF139Q8WU17 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RNF139Q8WU17 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.19■□□□□ 0.82
RNF139Q8WU17 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF139Q8WU17 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF139Q8WU17 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF139Q8WU17 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
RNF139Q8WU17 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.19■□□□□ 0.82
RNF139Q8WU17 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF139Q8WU17 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF139Q8WU17 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
RNF139Q8WU17 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.19■□□□□ 0.82
RNF139Q8WU17 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
RNF139Q8WU17 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.19■□□□□ 0.82
RNF139Q8WU17 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.19■□□□□ 0.82
RNF139Q8WU17 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF139Q8WU17 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF139Q8WU17 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RNF139Q8WU17 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.19■□□□□ 0.82
RNF139Q8WU17 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.19■□□□□ 0.82
RNF139Q8WU17 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
RNF139Q8WU17 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.18■□□□□ 0.82
RNF139Q8WU17 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF139Q8WU17 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.18■□□□□ 0.82
RNF139Q8WU17 AC116562.4-201ENST00000641316 2276 ntBASIC20.18■□□□□ 0.82
RNF139Q8WU17 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF139Q8WU17 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF139Q8WU17 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF139Q8WU17 UNC93B2-201ENST00000285383 730 ntBASIC20.18■□□□□ 0.82
RNF139Q8WU17 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF139Q8WU17 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.18■□□□□ 0.82
RNF139Q8WU17 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RNF139Q8WU17 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.18■□□□□ 0.82
RNF139Q8WU17 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RNF139Q8WU17 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.18■□□□□ 0.82
RNF139Q8WU17 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.18■□□□□ 0.82
RNF139Q8WU17 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF139Q8WU17 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
RNF139Q8WU17 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
RNF139Q8WU17 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.18■□□□□ 0.82
RNF139Q8WU17 ZNF815P-204ENST00000434898 1737 ntBASIC20.18■□□□□ 0.82
RNF139Q8WU17 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.18■□□□□ 0.82
RNF139Q8WU17 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RNF139Q8WU17 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RNF139Q8WU17 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.17■□□□□ 0.82
RNF139Q8WU17 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF139Q8WU17 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF139Q8WU17 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF139Q8WU17 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF139Q8WU17 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RNF139Q8WU17 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.17■□□□□ 0.82
RNF139Q8WU17 AC093484.2-201ENST00000580996 2166 ntBASIC20.17■□□□□ 0.82
RNF139Q8WU17 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF139Q8WU17 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.17■□□□□ 0.82
RNF139Q8WU17 AC004951.3-201ENST00000418645 1148 ntBASIC20.17■□□□□ 0.82
RNF139Q8WU17 B3GAT3P1-201ENST00000471720 806 ntBASIC20.17■□□□□ 0.82
RNF139Q8WU17 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF139Q8WU17 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
RNF139Q8WU17 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.17■□□□□ 0.82
RNF139Q8WU17 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.17■□□□□ 0.82
RNF139Q8WU17 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.17■□□□□ 0.82
RNF139Q8WU17 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.17■□□□□ 0.82
RNF139Q8WU17 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.17■□□□□ 0.82
RNF139Q8WU17 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF139Q8WU17 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF139Q8WU17 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RNF139Q8WU17 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
RNF139Q8WU17 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
RNF139Q8WU17 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF139Q8WU17 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF139Q8WU17 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF139Q8WU17 RCC2P6-201ENST00000526625 1557 ntBASIC20.17■□□□□ 0.82
RNF139Q8WU17 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RNF139Q8WU17 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF139Q8WU17 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF139Q8WU17 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.16■□□□□ 0.82
RNF139Q8WU17 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
RNF139Q8WU17 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF139Q8WU17 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.16■□□□□ 0.82
RNF139Q8WU17 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF139Q8WU17 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RNF139Q8WU17 AC011506.1-201ENST00000474329 610 ntBASIC20.16■□□□□ 0.82
RNF139Q8WU17 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.16■□□□□ 0.82
RNF139Q8WU17 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.16■□□□□ 0.82
RNF139Q8WU17 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
RNF139Q8WU17 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.16■□□□□ 0.82
RNF139Q8WU17 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.16■□□□□ 0.82
RNF139Q8WU17 AC011298.2-201ENST00000617989 482 ntBASIC20.16■□□□□ 0.82
RNF139Q8WU17 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF139Q8WU17 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
RNF139Q8WU17 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF139Q8WU17 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF139Q8WU17 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms