Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCHCR1Q8TD31 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CCHCR1Q8TD31 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCHCR1Q8TD31 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.02■□□□□ 0.79
CCHCR1Q8TD31 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CCHCR1Q8TD31 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCHCR1Q8TD31 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCHCR1Q8TD31 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCHCR1Q8TD31 AL161938.1-201ENST00000569833 2180 ntBASIC20.01■□□□□ 0.79
CCHCR1Q8TD31 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCHCR1Q8TD31 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCHCR1Q8TD31 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CCHCR1Q8TD31 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CCHCR1Q8TD31 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCHCR1Q8TD31 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.01■□□□□ 0.79
CCHCR1Q8TD31 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.01■□□□□ 0.79
CCHCR1Q8TD31 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCHCR1Q8TD31 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCHCR1Q8TD31 SOX15-203ENST00000570788 1093 ntBASIC20.01■□□□□ 0.79
CCHCR1Q8TD31 AC006557.6-201ENST00000623071 864 ntBASIC20.01■□□□□ 0.79
CCHCR1Q8TD31 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCHCR1Q8TD31 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CCHCR1Q8TD31 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCHCR1Q8TD31 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCHCR1Q8TD31 ZNF815P-204ENST00000434898 1737 ntBASIC20.01■□□□□ 0.79
CCHCR1Q8TD31 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCHCR1Q8TD31 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CCHCR1Q8TD31 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20■□□□□ 0.79
CCHCR1Q8TD31 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CCHCR1Q8TD31 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CCHCR1Q8TD31 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CCHCR1Q8TD31 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CCHCR1Q8TD31 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCHCR1Q8TD31 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
CCHCR1Q8TD31 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
CCHCR1Q8TD31 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCHCR1Q8TD31 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
CCHCR1Q8TD31 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20■□□□□ 0.79
CCHCR1Q8TD31 ABHD17AP6-201ENST00000458502 1044 ntBASIC20■□□□□ 0.79
CCHCR1Q8TD31 UNC93B4-201ENST00000505679 747 ntBASIC20■□□□□ 0.79
CCHCR1Q8TD31 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20■□□□□ 0.79
CCHCR1Q8TD31 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20■□□□□ 0.79
CCHCR1Q8TD31 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20■□□□□ 0.79
CCHCR1Q8TD31 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCHCR1Q8TD31 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCHCR1Q8TD31 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCHCR1Q8TD31 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20■□□□□ 0.79
CCHCR1Q8TD31 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CCHCR1Q8TD31 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CCHCR1Q8TD31 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCHCR1Q8TD31 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCHCR1Q8TD31 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CCHCR1Q8TD31 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCHCR1Q8TD31 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCHCR1Q8TD31 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCHCR1Q8TD31 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCHCR1Q8TD31 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCHCR1Q8TD31 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCHCR1Q8TD31 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCHCR1Q8TD31 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCHCR1Q8TD31 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCHCR1Q8TD31 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCHCR1Q8TD31 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CCHCR1Q8TD31 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.99■□□□□ 0.79
CCHCR1Q8TD31 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
CCHCR1Q8TD31 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.99■□□□□ 0.79
CCHCR1Q8TD31 AP003097.1-201ENST00000530657 1135 ntBASIC19.99■□□□□ 0.79
CCHCR1Q8TD31 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CCHCR1Q8TD31 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCHCR1Q8TD31 CROCCP3-202ENST00000420820 1947 ntBASIC19.99■□□□□ 0.79
CCHCR1Q8TD31 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCHCR1Q8TD31 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CCHCR1Q8TD31 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.99■□□□□ 0.79
CCHCR1Q8TD31 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCHCR1Q8TD31 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.99■□□□□ 0.79
CCHCR1Q8TD31 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCHCR1Q8TD31 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCHCR1Q8TD31 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
CCHCR1Q8TD31 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CCHCR1Q8TD31 TEX21P-204ENST00000641479 1693 ntBASIC19.98■□□□□ 0.79
CCHCR1Q8TD31 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCHCR1Q8TD31 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.98■□□□□ 0.79
CCHCR1Q8TD31 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCHCR1Q8TD31 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCHCR1Q8TD31 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.98■□□□□ 0.79
CCHCR1Q8TD31 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCHCR1Q8TD31 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCHCR1Q8TD31 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.98■□□□□ 0.79
CCHCR1Q8TD31 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.98■□□□□ 0.79
CCHCR1Q8TD31 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CCHCR1Q8TD31 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.98■□□□□ 0.79
CCHCR1Q8TD31 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCHCR1Q8TD31 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.98■□□□□ 0.79
CCHCR1Q8TD31 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.98■□□□□ 0.79
CCHCR1Q8TD31 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.98■□□□□ 0.79
CCHCR1Q8TD31 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCHCR1Q8TD31 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCHCR1Q8TD31 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.98■□□□□ 0.79
CCHCR1Q8TD31 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CCHCR1Q8TD31 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms