Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.41
CNIH3Q8TBE1 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
CNIH3Q8TBE1 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CNIH3Q8TBE1 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CNIH3Q8TBE1 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CNIH3Q8TBE1 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CNIH3Q8TBE1 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CNIH3Q8TBE1 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CNIH3Q8TBE1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
CNIH3Q8TBE1 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CNIH3Q8TBE1 UBE2DNL-204ENST00000602536 740 ntBASIC17.58■□□□□ 0.4
CNIH3Q8TBE1 AC016405.3-201ENST00000607710 860 ntBASIC17.58■□□□□ 0.4
CNIH3Q8TBE1 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.58■□□□□ 0.4
CNIH3Q8TBE1 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CNIH3Q8TBE1 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CNIH3Q8TBE1 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CNIH3Q8TBE1 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.58■□□□□ 0.4
CNIH3Q8TBE1 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.58■□□□□ 0.4
CNIH3Q8TBE1 AC012313.1-201ENST00000593393 3059 ntBASIC17.58■□□□□ 0.4
CNIH3Q8TBE1 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CNIH3Q8TBE1 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.58■□□□□ 0.4
CNIH3Q8TBE1 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CNIH3Q8TBE1 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CNIH3Q8TBE1 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNIH3Q8TBE1 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNIH3Q8TBE1 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNIH3Q8TBE1 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNIH3Q8TBE1 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNIH3Q8TBE1 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNIH3Q8TBE1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.57■□□□□ 0.4
CNIH3Q8TBE1 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
CNIH3Q8TBE1 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CNIH3Q8TBE1 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNIH3Q8TBE1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.57■□□□□ 0.4
CNIH3Q8TBE1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.57■□□□□ 0.4
CNIH3Q8TBE1 AC005837.3-201ENST00000612163 286 ntBASIC17.57■□□□□ 0.4
CNIH3Q8TBE1 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CNIH3Q8TBE1 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNIH3Q8TBE1 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CNIH3Q8TBE1 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
CNIH3Q8TBE1 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNIH3Q8TBE1 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNIH3Q8TBE1 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNIH3Q8TBE1 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNIH3Q8TBE1 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNIH3Q8TBE1 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNIH3Q8TBE1 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.56■□□□□ 0.4
CNIH3Q8TBE1 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.56■□□□□ 0.4
CNIH3Q8TBE1 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.56■□□□□ 0.4
CNIH3Q8TBE1 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNIH3Q8TBE1 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CNIH3Q8TBE1 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CNIH3Q8TBE1 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.56■□□□□ 0.4
CNIH3Q8TBE1 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.56■□□□□ 0.4
CNIH3Q8TBE1 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
CNIH3Q8TBE1 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
CNIH3Q8TBE1 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNIH3Q8TBE1 ABALON-201ENST00000629058 1903 ntBASIC17.56■□□□□ 0.4
CNIH3Q8TBE1 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNIH3Q8TBE1 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNIH3Q8TBE1 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNIH3Q8TBE1 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNIH3Q8TBE1 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CNIH3Q8TBE1 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNIH3Q8TBE1 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CNIH3Q8TBE1 AC018553.1-201ENST00000616682 1458 ntBASIC17.56■□□□□ 0.4
CNIH3Q8TBE1 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.56■□□□□ 0.4
CNIH3Q8TBE1 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNIH3Q8TBE1 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNIH3Q8TBE1 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNIH3Q8TBE1 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNIH3Q8TBE1 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CNIH3Q8TBE1 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CNIH3Q8TBE1 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNIH3Q8TBE1 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNIH3Q8TBE1 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNIH3Q8TBE1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNIH3Q8TBE1 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.55■□□□□ 0.4
CNIH3Q8TBE1 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
CNIH3Q8TBE1 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.55■□□□□ 0.4
CNIH3Q8TBE1 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CNIH3Q8TBE1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNIH3Q8TBE1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNIH3Q8TBE1 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
CNIH3Q8TBE1 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CNIH3Q8TBE1 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNIH3Q8TBE1 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.55■□□□□ 0.4
CNIH3Q8TBE1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CNIH3Q8TBE1 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNIH3Q8TBE1 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.55■□□□□ 0.4
CNIH3Q8TBE1 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNIH3Q8TBE1 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CNIH3Q8TBE1 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNIH3Q8TBE1 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNIH3Q8TBE1 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CNIH3Q8TBE1 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CNIH3Q8TBE1 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CNIH3Q8TBE1 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNIH3Q8TBE1 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.54■□□□□ 0.4
CNIH3Q8TBE1 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms