Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF248Q8NDW4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF248Q8NDW4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF248Q8NDW4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.38■□□□□ 0.53
ZNF248Q8NDW4 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF248Q8NDW4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.38■□□□□ 0.53
ZNF248Q8NDW4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
ZNF248Q8NDW4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF248Q8NDW4 KRT16P6-202ENST00000425692 1426 ntBASIC18.38■□□□□ 0.53
ZNF248Q8NDW4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF248Q8NDW4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF248Q8NDW4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.38■□□□□ 0.53
ZNF248Q8NDW4 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.37■□□□□ 0.53
ZNF248Q8NDW4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF248Q8NDW4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
ZNF248Q8NDW4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF248Q8NDW4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF248Q8NDW4 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
ZNF248Q8NDW4 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF248Q8NDW4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.37■□□□□ 0.53
ZNF248Q8NDW4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF248Q8NDW4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF248Q8NDW4 AL353719.1-201ENST00000566847 864 ntBASIC18.37■□□□□ 0.53
ZNF248Q8NDW4 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
ZNF248Q8NDW4 AL023803.3-201ENST00000615559 522 ntBASIC18.37■□□□□ 0.53
ZNF248Q8NDW4 AC008622.2-201ENST00000617006 1229 ntBASIC18.37■□□□□ 0.53
ZNF248Q8NDW4 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
ZNF248Q8NDW4 HLA-A-209ENST00000638375 975 ntBASIC18.37■□□□□ 0.53
ZNF248Q8NDW4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF248Q8NDW4 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
ZNF248Q8NDW4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
ZNF248Q8NDW4 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF248Q8NDW4 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF248Q8NDW4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.37■□□□□ 0.53
ZNF248Q8NDW4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.37■□□□□ 0.53
ZNF248Q8NDW4 AC018553.1-201ENST00000616682 1458 ntBASIC18.37■□□□□ 0.53
ZNF248Q8NDW4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF248Q8NDW4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
ZNF248Q8NDW4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF248Q8NDW4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF248Q8NDW4 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.37■□□□□ 0.53
ZNF248Q8NDW4 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.37■□□□□ 0.53
ZNF248Q8NDW4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
ZNF248Q8NDW4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF248Q8NDW4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF248Q8NDW4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF248Q8NDW4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
ZNF248Q8NDW4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF248Q8NDW4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF248Q8NDW4 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF248Q8NDW4 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF248Q8NDW4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF248Q8NDW4 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF248Q8NDW4 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.36■□□□□ 0.53
ZNF248Q8NDW4 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF248Q8NDW4 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
ZNF248Q8NDW4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
ZNF248Q8NDW4 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.36■□□□□ 0.53
ZNF248Q8NDW4 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF248Q8NDW4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.36■□□□□ 0.53
ZNF248Q8NDW4 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF248Q8NDW4 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF248Q8NDW4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.35■□□□□ 0.53
ZNF248Q8NDW4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.35■□□□□ 0.53
ZNF248Q8NDW4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF248Q8NDW4 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF248Q8NDW4 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.35■□□□□ 0.53
ZNF248Q8NDW4 AP005212.1-201ENST00000581547 1997 ntBASIC18.35■□□□□ 0.53
ZNF248Q8NDW4 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF248Q8NDW4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF248Q8NDW4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF248Q8NDW4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.35■□□□□ 0.53
ZNF248Q8NDW4 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.35■□□□□ 0.53
ZNF248Q8NDW4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF248Q8NDW4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.35■□□□□ 0.53
ZNF248Q8NDW4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF248Q8NDW4 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF248Q8NDW4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF248Q8NDW4 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF248Q8NDW4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF248Q8NDW4 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.35■□□□□ 0.53
ZNF248Q8NDW4 VENTXP5-201ENST00000523979 775 ntBASIC18.35■□□□□ 0.53
ZNF248Q8NDW4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.35■□□□□ 0.53
ZNF248Q8NDW4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF248Q8NDW4 AC073314.1-201ENST00000568729 2216 ntBASIC18.35■□□□□ 0.53
ZNF248Q8NDW4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF248Q8NDW4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
ZNF248Q8NDW4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF248Q8NDW4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.35■□□□□ 0.53
ZNF248Q8NDW4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.35■□□□□ 0.53
ZNF248Q8NDW4 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF248Q8NDW4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF248Q8NDW4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ZNF248Q8NDW4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ZNF248Q8NDW4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF248Q8NDW4 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF248Q8NDW4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF248Q8NDW4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.34■□□□□ 0.53
ZNF248Q8NDW4 AC020907.5-201ENST00000624372 1936 ntBASIC18.34■□□□□ 0.53
ZNF248Q8NDW4 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms