Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 AP005242.2-201ENST00000580065 1175 ntBASIC21.76■■□□□ 1.07
RETREG2Q8NC44 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
RETREG2Q8NC44 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RETREG2Q8NC44 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
RETREG2Q8NC44 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.76■■□□□ 1.07
RETREG2Q8NC44 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RETREG2Q8NC44 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RETREG2Q8NC44 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
RETREG2Q8NC44 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.75■■□□□ 1.07
RETREG2Q8NC44 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RETREG2Q8NC44 AP001271.2-201ENST00000624018 1556 ntBASIC21.75■■□□□ 1.07
RETREG2Q8NC44 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
RETREG2Q8NC44 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RETREG2Q8NC44 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
RETREG2Q8NC44 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RETREG2Q8NC44 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RETREG2Q8NC44 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RETREG2Q8NC44 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RETREG2Q8NC44 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RETREG2Q8NC44 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RETREG2Q8NC44 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.75■■□□□ 1.07
RETREG2Q8NC44 AC128688.1-201ENST00000487626 519 ntBASIC21.75■■□□□ 1.07
RETREG2Q8NC44 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.75■■□□□ 1.07
RETREG2Q8NC44 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
RETREG2Q8NC44 DGCR10-201ENST00000609839 495 ntBASIC21.75■■□□□ 1.07
RETREG2Q8NC44 AC131212.4-201ENST00000623606 975 ntBASIC21.75■■□□□ 1.07
RETREG2Q8NC44 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.75■■□□□ 1.07
RETREG2Q8NC44 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
RETREG2Q8NC44 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.75■■□□□ 1.07
RETREG2Q8NC44 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RETREG2Q8NC44 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.75■■□□□ 1.07
RETREG2Q8NC44 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
RETREG2Q8NC44 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RETREG2Q8NC44 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
RETREG2Q8NC44 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RETREG2Q8NC44 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RETREG2Q8NC44 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
RETREG2Q8NC44 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RETREG2Q8NC44 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.74■■□□□ 1.07
RETREG2Q8NC44 MESTP1-201ENST00000404287 994 ntBASIC21.74■■□□□ 1.07
RETREG2Q8NC44 CRYGFP-201ENST00000418459 633 ntBASIC21.74■■□□□ 1.07
RETREG2Q8NC44 ECEL1P2-202ENST00000465689 757 ntBASIC21.74■■□□□ 1.07
RETREG2Q8NC44 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
RETREG2Q8NC44 AC097488.1-201ENST00000507834 756 ntBASIC21.74■■□□□ 1.07
RETREG2Q8NC44 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RETREG2Q8NC44 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.74■■□□□ 1.07
RETREG2Q8NC44 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
RETREG2Q8NC44 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RETREG2Q8NC44 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RETREG2Q8NC44 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
RETREG2Q8NC44 AC009237.14-201ENST00000609975 1594 ntBASIC21.74■■□□□ 1.07
RETREG2Q8NC44 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RETREG2Q8NC44 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.73■■□□□ 1.07
RETREG2Q8NC44 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RETREG2Q8NC44 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
RETREG2Q8NC44 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RETREG2Q8NC44 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RETREG2Q8NC44 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RETREG2Q8NC44 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RETREG2Q8NC44 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.73■■□□□ 1.07
RETREG2Q8NC44 TSPY14P-201ENST00000303979 915 ntBASIC21.73■■□□□ 1.07
RETREG2Q8NC44 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RETREG2Q8NC44 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RETREG2Q8NC44 B3GAT3P1-201ENST00000471720 806 ntBASIC21.73■■□□□ 1.07
RETREG2Q8NC44 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.73■■□□□ 1.07
RETREG2Q8NC44 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.73■■□□□ 1.07
RETREG2Q8NC44 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RETREG2Q8NC44 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RETREG2Q8NC44 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RETREG2Q8NC44 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
RETREG2Q8NC44 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
RETREG2Q8NC44 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.73■■□□□ 1.07
RETREG2Q8NC44 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
RETREG2Q8NC44 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RETREG2Q8NC44 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.72■■□□□ 1.07
RETREG2Q8NC44 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RETREG2Q8NC44 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.72■■□□□ 1.07
RETREG2Q8NC44 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.72■■□□□ 1.07
RETREG2Q8NC44 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
RETREG2Q8NC44 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RETREG2Q8NC44 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RETREG2Q8NC44 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
RETREG2Q8NC44 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RETREG2Q8NC44 AC005332.7-201ENST00000614046 2005 ntBASIC21.72■■□□□ 1.07
RETREG2Q8NC44 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RETREG2Q8NC44 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RETREG2Q8NC44 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RETREG2Q8NC44 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
RETREG2Q8NC44 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RETREG2Q8NC44 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RETREG2Q8NC44 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC21.72■■□□□ 1.07
RETREG2Q8NC44 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
RETREG2Q8NC44 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RETREG2Q8NC44 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.72■■□□□ 1.07
RETREG2Q8NC44 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.72■■□□□ 1.07
RETREG2Q8NC44 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC21.72■■□□□ 1.07
RETREG2Q8NC44 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RETREG2Q8NC44 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.72■■□□□ 1.07
RETREG2Q8NC44 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RETREG2Q8NC44 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms