Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.79■□□□□ 0.6
CPSF7Q8N684 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPSF7Q8N684 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPSF7Q8N684 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.79■□□□□ 0.6
CPSF7Q8N684 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CPSF7Q8N684 AC090164.3-201ENST00000610780 2143 ntBASIC18.79■□□□□ 0.6
CPSF7Q8N684 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPSF7Q8N684 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CPSF7Q8N684 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CPSF7Q8N684 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CPSF7Q8N684 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPSF7Q8N684 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPSF7Q8N684 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPSF7Q8N684 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPSF7Q8N684 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.78■□□□□ 0.6
CPSF7Q8N684 ESRRAP1-201ENST00000400596 1257 ntBASIC18.78■□□□□ 0.6
CPSF7Q8N684 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CPSF7Q8N684 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
CPSF7Q8N684 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CPSF7Q8N684 AC008687.6-201ENST00000596318 630 ntBASIC18.78■□□□□ 0.6
CPSF7Q8N684 AL589743.5-201ENST00000616611 1050 ntBASIC18.78■□□□□ 0.6
CPSF7Q8N684 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.78■□□□□ 0.6
CPSF7Q8N684 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CPSF7Q8N684 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.78■□□□□ 0.6
CPSF7Q8N684 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPSF7Q8N684 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CPSF7Q8N684 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPSF7Q8N684 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPSF7Q8N684 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPSF7Q8N684 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.78■□□□□ 0.6
CPSF7Q8N684 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
CPSF7Q8N684 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPSF7Q8N684 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CPSF7Q8N684 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CPSF7Q8N684 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.77■□□□□ 0.6
CPSF7Q8N684 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPSF7Q8N684 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.77■□□□□ 0.6
CPSF7Q8N684 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPSF7Q8N684 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CPSF7Q8N684 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.77■□□□□ 0.6
CPSF7Q8N684 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPSF7Q8N684 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPSF7Q8N684 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CPSF7Q8N684 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CPSF7Q8N684 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.77■□□□□ 0.6
CPSF7Q8N684 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.77■□□□□ 0.6
CPSF7Q8N684 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.77■□□□□ 0.6
CPSF7Q8N684 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.77■□□□□ 0.6
CPSF7Q8N684 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPSF7Q8N684 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.77■□□□□ 0.6
CPSF7Q8N684 Z98044.1-201ENST00000632503 1764 ntBASIC18.77■□□□□ 0.6
CPSF7Q8N684 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.77■□□□□ 0.6
CPSF7Q8N684 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.77■□□□□ 0.6
CPSF7Q8N684 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.77■□□□□ 0.6
CPSF7Q8N684 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPSF7Q8N684 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CPSF7Q8N684 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CPSF7Q8N684 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPSF7Q8N684 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CPSF7Q8N684 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CPSF7Q8N684 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CPSF7Q8N684 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.77■□□□□ 0.59
CPSF7Q8N684 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CPSF7Q8N684 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.76■□□□□ 0.59
CPSF7Q8N684 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPSF7Q8N684 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPSF7Q8N684 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.76■□□□□ 0.59
CPSF7Q8N684 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPSF7Q8N684 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
CPSF7Q8N684 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPSF7Q8N684 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.76■□□□□ 0.59
CPSF7Q8N684 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPSF7Q8N684 PRORSD1P-201ENST00000295112 541 ntBASIC18.76■□□□□ 0.59
CPSF7Q8N684 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPSF7Q8N684 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CPSF7Q8N684 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.76■□□□□ 0.59
CPSF7Q8N684 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.76■□□□□ 0.59
CPSF7Q8N684 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.76■□□□□ 0.59
CPSF7Q8N684 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.76■□□□□ 0.59
CPSF7Q8N684 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.76■□□□□ 0.59
CPSF7Q8N684 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.76■□□□□ 0.59
CPSF7Q8N684 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CPSF7Q8N684 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CPSF7Q8N684 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.76■□□□□ 0.59
CPSF7Q8N684 WIZP1-201ENST00000531444 2299 ntBASIC18.76■□□□□ 0.59
CPSF7Q8N684 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.76■□□□□ 0.59
CPSF7Q8N684 AC018553.1-201ENST00000616682 1458 ntBASIC18.76■□□□□ 0.59
CPSF7Q8N684 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPSF7Q8N684 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPSF7Q8N684 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPSF7Q8N684 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPSF7Q8N684 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPSF7Q8N684 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CPSF7Q8N684 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPSF7Q8N684 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CPSF7Q8N684 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPSF7Q8N684 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CPSF7Q8N684 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPSF7Q8N684 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CPSF7Q8N684 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms