Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC116Q8IYX3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC116Q8IYX3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC116Q8IYX3 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CCDC116Q8IYX3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC116Q8IYX3 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CCDC116Q8IYX3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC116Q8IYX3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC116Q8IYX3 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC116Q8IYX3 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CCDC116Q8IYX3 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC116Q8IYX3 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC116Q8IYX3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC116Q8IYX3 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CCDC116Q8IYX3 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC116Q8IYX3 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CCDC116Q8IYX3 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC116Q8IYX3 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CCDC116Q8IYX3 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC116Q8IYX3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC116Q8IYX3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC116Q8IYX3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC116Q8IYX3 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC116Q8IYX3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CCDC116Q8IYX3 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC116Q8IYX3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CCDC116Q8IYX3 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC116Q8IYX3 AC141586.3-201ENST00000562166 1838 ntBASIC18.12■□□□□ 0.49
CCDC116Q8IYX3 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CCDC116Q8IYX3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CCDC116Q8IYX3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CCDC116Q8IYX3 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC116Q8IYX3 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CCDC116Q8IYX3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC116Q8IYX3 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC116Q8IYX3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC116Q8IYX3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC116Q8IYX3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC116Q8IYX3 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC116Q8IYX3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC116Q8IYX3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC116Q8IYX3 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.11■□□□□ 0.49
CCDC116Q8IYX3 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.11■□□□□ 0.49
CCDC116Q8IYX3 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CCDC116Q8IYX3 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.11■□□□□ 0.49
CCDC116Q8IYX3 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.11■□□□□ 0.49
CCDC116Q8IYX3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC116Q8IYX3 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC116Q8IYX3 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC116Q8IYX3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC116Q8IYX3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
CCDC116Q8IYX3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC116Q8IYX3 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.11■□□□□ 0.49
CCDC116Q8IYX3 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC116Q8IYX3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC116Q8IYX3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
CCDC116Q8IYX3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CCDC116Q8IYX3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC116Q8IYX3 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC116Q8IYX3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CCDC116Q8IYX3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC116Q8IYX3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC116Q8IYX3 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC116Q8IYX3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC116Q8IYX3 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC116Q8IYX3 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.1■□□□□ 0.49
CCDC116Q8IYX3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.1■□□□□ 0.49
CCDC116Q8IYX3 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.1■□□□□ 0.49
CCDC116Q8IYX3 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC116Q8IYX3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.1■□□□□ 0.49
CCDC116Q8IYX3 AL359736.2-201ENST00000621992 437 ntBASIC18.1■□□□□ 0.49
CCDC116Q8IYX3 FAM197Y4-202ENST00000622692 608 ntBASIC18.1■□□□□ 0.49
CCDC116Q8IYX3 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC116Q8IYX3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
CCDC116Q8IYX3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC116Q8IYX3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC116Q8IYX3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC116Q8IYX3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC116Q8IYX3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC116Q8IYX3 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC116Q8IYX3 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC116Q8IYX3 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC116Q8IYX3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC116Q8IYX3 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC116Q8IYX3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.09■□□□□ 0.49
CCDC116Q8IYX3 PRORSD1P-201ENST00000295112 541 ntBASIC18.09■□□□□ 0.49
CCDC116Q8IYX3 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC116Q8IYX3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC116Q8IYX3 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CCDC116Q8IYX3 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.09■□□□□ 0.49
CCDC116Q8IYX3 AL160286.2-201ENST00000567150 934 ntBASIC18.09■□□□□ 0.49
CCDC116Q8IYX3 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.09■□□□□ 0.49
CCDC116Q8IYX3 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.09■□□□□ 0.49
CCDC116Q8IYX3 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.09■□□□□ 0.49
CCDC116Q8IYX3 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC116Q8IYX3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC116Q8IYX3 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC116Q8IYX3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CCDC116Q8IYX3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC116Q8IYX3 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms