Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDKL3Q8IVW4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.76■□□□□ 0.75
CDKL3Q8IVW4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.76■□□□□ 0.75
CDKL3Q8IVW4 C1QL1P1-201ENST00000568105 661 ntBASIC19.76■□□□□ 0.75
CDKL3Q8IVW4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.76■□□□□ 0.75
CDKL3Q8IVW4 MTDHP1-201ENST00000605323 784 ntBASIC19.76■□□□□ 0.75
CDKL3Q8IVW4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.76■□□□□ 0.75
CDKL3Q8IVW4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.76■□□□□ 0.75
CDKL3Q8IVW4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDKL3Q8IVW4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.76■□□□□ 0.75
CDKL3Q8IVW4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDKL3Q8IVW4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDKL3Q8IVW4 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CDKL3Q8IVW4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDKL3Q8IVW4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDKL3Q8IVW4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDKL3Q8IVW4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.76■□□□□ 0.75
CDKL3Q8IVW4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDKL3Q8IVW4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDKL3Q8IVW4 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDKL3Q8IVW4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.75■□□□□ 0.75
CDKL3Q8IVW4 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.75■□□□□ 0.75
CDKL3Q8IVW4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.75■□□□□ 0.75
CDKL3Q8IVW4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDKL3Q8IVW4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CDKL3Q8IVW4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CDKL3Q8IVW4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDKL3Q8IVW4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CDKL3Q8IVW4 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDKL3Q8IVW4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.75■□□□□ 0.75
CDKL3Q8IVW4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.75■□□□□ 0.75
CDKL3Q8IVW4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.75■□□□□ 0.75
CDKL3Q8IVW4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CDKL3Q8IVW4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDKL3Q8IVW4 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDKL3Q8IVW4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.75■□□□□ 0.75
CDKL3Q8IVW4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDKL3Q8IVW4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.75■□□□□ 0.75
CDKL3Q8IVW4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.75■□□□□ 0.75
CDKL3Q8IVW4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CDKL3Q8IVW4 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDKL3Q8IVW4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDKL3Q8IVW4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDKL3Q8IVW4 AC093503.3-201ENST00000624917 2352 ntBASIC19.75■□□□□ 0.75
CDKL3Q8IVW4 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDKL3Q8IVW4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
CDKL3Q8IVW4 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
CDKL3Q8IVW4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
CDKL3Q8IVW4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.74■□□□□ 0.75
CDKL3Q8IVW4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CDKL3Q8IVW4 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDKL3Q8IVW4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDKL3Q8IVW4 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDKL3Q8IVW4 KRT18P6-201ENST00000555540 1265 ntBASIC19.74■□□□□ 0.75
CDKL3Q8IVW4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.74■□□□□ 0.75
CDKL3Q8IVW4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.74■□□□□ 0.75
CDKL3Q8IVW4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDKL3Q8IVW4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDKL3Q8IVW4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDKL3Q8IVW4 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDKL3Q8IVW4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
CDKL3Q8IVW4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDKL3Q8IVW4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDKL3Q8IVW4 IRX1P1-201ENST00000438849 1838 ntBASIC19.74■□□□□ 0.75
CDKL3Q8IVW4 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CDKL3Q8IVW4 FP475955.4-201ENST00000623131 1990 ntBASIC19.74■□□□□ 0.75
CDKL3Q8IVW4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.73■□□□□ 0.75
CDKL3Q8IVW4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.73■□□□□ 0.75
CDKL3Q8IVW4 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CDKL3Q8IVW4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
CDKL3Q8IVW4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDKL3Q8IVW4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.73■□□□□ 0.75
CDKL3Q8IVW4 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.73■□□□□ 0.75
CDKL3Q8IVW4 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.73■□□□□ 0.75
CDKL3Q8IVW4 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDKL3Q8IVW4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDKL3Q8IVW4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.73■□□□□ 0.75
CDKL3Q8IVW4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.73■□□□□ 0.75
CDKL3Q8IVW4 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.73■□□□□ 0.75
CDKL3Q8IVW4 AC233263.1-201ENST00000578059 224 ntBASIC19.73■□□□□ 0.75
CDKL3Q8IVW4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.73■□□□□ 0.75
CDKL3Q8IVW4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDKL3Q8IVW4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDKL3Q8IVW4 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDKL3Q8IVW4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDKL3Q8IVW4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.73■□□□□ 0.75
CDKL3Q8IVW4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDKL3Q8IVW4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CDKL3Q8IVW4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.72■□□□□ 0.75
CDKL3Q8IVW4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDKL3Q8IVW4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CDKL3Q8IVW4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDKL3Q8IVW4 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDKL3Q8IVW4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CDKL3Q8IVW4 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDKL3Q8IVW4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDKL3Q8IVW4 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CDKL3Q8IVW4 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.72■□□□□ 0.75
CDKL3Q8IVW4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.72■□□□□ 0.75
CDKL3Q8IVW4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms