Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.63■□□□□ 0.89
NPAS4Q8IUM7 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.63■□□□□ 0.89
NPAS4Q8IUM7 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NPAS4Q8IUM7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPAS4Q8IUM7 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPAS4Q8IUM7 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.63■□□□□ 0.89
NPAS4Q8IUM7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPAS4Q8IUM7 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.63■□□□□ 0.89
NPAS4Q8IUM7 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPAS4Q8IUM7 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NPAS4Q8IUM7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
NPAS4Q8IUM7 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
NPAS4Q8IUM7 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NPAS4Q8IUM7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
NPAS4Q8IUM7 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NPAS4Q8IUM7 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NPAS4Q8IUM7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NPAS4Q8IUM7 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.62■□□□□ 0.89
NPAS4Q8IUM7 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NPAS4Q8IUM7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.62■□□□□ 0.89
NPAS4Q8IUM7 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NPAS4Q8IUM7 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NPAS4Q8IUM7 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NPAS4Q8IUM7 AL450487.1-201ENST00000426799 995 ntBASIC20.62■□□□□ 0.89
NPAS4Q8IUM7 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.62■□□□□ 0.89
NPAS4Q8IUM7 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NPAS4Q8IUM7 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.62■□□□□ 0.89
NPAS4Q8IUM7 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NPAS4Q8IUM7 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.62■□□□□ 0.89
NPAS4Q8IUM7 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.62■□□□□ 0.89
NPAS4Q8IUM7 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.62■□□□□ 0.89
NPAS4Q8IUM7 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
NPAS4Q8IUM7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.62■□□□□ 0.89
NPAS4Q8IUM7 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NPAS4Q8IUM7 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.62■□□□□ 0.89
NPAS4Q8IUM7 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NPAS4Q8IUM7 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
NPAS4Q8IUM7 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NPAS4Q8IUM7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
NPAS4Q8IUM7 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
NPAS4Q8IUM7 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.61■□□□□ 0.89
NPAS4Q8IUM7 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NPAS4Q8IUM7 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
NPAS4Q8IUM7 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.61■□□□□ 0.89
NPAS4Q8IUM7 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NPAS4Q8IUM7 CLEC4GP1-201ENST00000596555 870 ntBASIC20.61■□□□□ 0.89
NPAS4Q8IUM7 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.61■□□□□ 0.89
NPAS4Q8IUM7 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.61■□□□□ 0.89
NPAS4Q8IUM7 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NPAS4Q8IUM7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.61■□□□□ 0.89
NPAS4Q8IUM7 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.61■□□□□ 0.89
NPAS4Q8IUM7 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
NPAS4Q8IUM7 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NPAS4Q8IUM7 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NPAS4Q8IUM7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.61■□□□□ 0.89
NPAS4Q8IUM7 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.6■□□□□ 0.89
NPAS4Q8IUM7 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPAS4Q8IUM7 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NPAS4Q8IUM7 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.6■□□□□ 0.89
NPAS4Q8IUM7 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.6■□□□□ 0.89
NPAS4Q8IUM7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPAS4Q8IUM7 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.6■□□□□ 0.89
NPAS4Q8IUM7 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.6■□□□□ 0.89
NPAS4Q8IUM7 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPAS4Q8IUM7 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPAS4Q8IUM7 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPAS4Q8IUM7 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NPAS4Q8IUM7 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NPAS4Q8IUM7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
NPAS4Q8IUM7 TSPY21P-201ENST00000433481 731 ntBASIC20.6■□□□□ 0.89
NPAS4Q8IUM7 TSPY23P-201ENST00000440136 739 ntBASIC20.6■□□□□ 0.89
NPAS4Q8IUM7 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.6■□□□□ 0.89
NPAS4Q8IUM7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.6■□□□□ 0.89
NPAS4Q8IUM7 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NPAS4Q8IUM7 ZNF815P-204ENST00000434898 1737 ntBASIC20.6■□□□□ 0.89
NPAS4Q8IUM7 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.6■□□□□ 0.89
NPAS4Q8IUM7 AL137060.1-201ENST00000618151 2648 ntBASIC20.6■□□□□ 0.89
NPAS4Q8IUM7 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPAS4Q8IUM7 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPAS4Q8IUM7 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NPAS4Q8IUM7 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPAS4Q8IUM7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPAS4Q8IUM7 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.6■□□□□ 0.89
NPAS4Q8IUM7 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
NPAS4Q8IUM7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPAS4Q8IUM7 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPAS4Q8IUM7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NPAS4Q8IUM7 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPAS4Q8IUM7 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPAS4Q8IUM7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPAS4Q8IUM7 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPAS4Q8IUM7 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPAS4Q8IUM7 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPAS4Q8IUM7 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPAS4Q8IUM7 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NPAS4Q8IUM7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
NPAS4Q8IUM7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.59■□□□□ 0.89
NPAS4Q8IUM7 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
NPAS4Q8IUM7 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.59■□□□□ 0.89
NPAS4Q8IUM7 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms