Protein–RNA interactions for Protein: Q86V81

ALYREF, THO complex subunit 4, humanhuman

Known RBP Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREFQ86V81 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ALYREFQ86V81 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
ALYREFQ86V81 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.12■□□□□ 0.81
ALYREFQ86V81 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
ALYREFQ86V81 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
ALYREFQ86V81 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ALYREFQ86V81 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ALYREFQ86V81 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
ALYREFQ86V81 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
ALYREFQ86V81 TSPY14P-201ENST00000303979 915 ntBASIC20.12■□□□□ 0.81
ALYREFQ86V81 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ALYREFQ86V81 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ALYREFQ86V81 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.12■□□□□ 0.81
ALYREFQ86V81 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.12■□□□□ 0.81
ALYREFQ86V81 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.12■□□□□ 0.81
ALYREFQ86V81 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ALYREFQ86V81 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.12■□□□□ 0.81
ALYREFQ86V81 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.12■□□□□ 0.81
ALYREFQ86V81 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ALYREFQ86V81 CYP21A1P-202ENST00000354927 1481 ntBASIC20.11■□□□□ 0.81
ALYREFQ86V81 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
ALYREFQ86V81 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
ALYREFQ86V81 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ALYREFQ86V81 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ALYREFQ86V81 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ALYREFQ86V81 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.11■□□□□ 0.81
ALYREFQ86V81 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ALYREFQ86V81 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.11■□□□□ 0.81
ALYREFQ86V81 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
ALYREFQ86V81 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
ALYREFQ86V81 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.11■□□□□ 0.81
ALYREFQ86V81 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ALYREFQ86V81 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
ALYREFQ86V81 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ALYREFQ86V81 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.11■□□□□ 0.81
ALYREFQ86V81 HMGN1P19-201ENST00000436976 333 ntBASIC20.11■□□□□ 0.81
ALYREFQ86V81 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.11■□□□□ 0.81
ALYREFQ86V81 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.11■□□□□ 0.81
ALYREFQ86V81 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.11■□□□□ 0.81
ALYREFQ86V81 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.11■□□□□ 0.81
ALYREFQ86V81 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
ALYREFQ86V81 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
ALYREFQ86V81 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.11■□□□□ 0.81
ALYREFQ86V81 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
ALYREFQ86V81 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ALYREFQ86V81 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ALYREFQ86V81 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
ALYREFQ86V81 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ALYREFQ86V81 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ALYREFQ86V81 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ALYREFQ86V81 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
ALYREFQ86V81 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
ALYREFQ86V81 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ALYREFQ86V81 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.11■□□□□ 0.81
ALYREFQ86V81 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
ALYREFQ86V81 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
ALYREFQ86V81 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.1■□□□□ 0.81
ALYREFQ86V81 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
ALYREFQ86V81 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.1■□□□□ 0.81
ALYREFQ86V81 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.1■□□□□ 0.81
ALYREFQ86V81 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
ALYREFQ86V81 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ALYREFQ86V81 FAAHP1-202ENST00000446499 1238 ntBASIC20.1■□□□□ 0.81
ALYREFQ86V81 AL671277.2-201ENST00000458060 996 ntBASIC20.1■□□□□ 0.81
ALYREFQ86V81 AC111152.3-201ENST00000569699 673 ntBASIC20.1■□□□□ 0.81
ALYREFQ86V81 FAM87A-204ENST00000613235 858 ntBASIC20.1■□□□□ 0.81
ALYREFQ86V81 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.1■□□□□ 0.81
ALYREFQ86V81 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
ALYREFQ86V81 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.1■□□□□ 0.81
ALYREFQ86V81 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ALYREFQ86V81 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
ALYREFQ86V81 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ALYREFQ86V81 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.09■□□□□ 0.81
ALYREFQ86V81 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.09■□□□□ 0.81
ALYREFQ86V81 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ALYREFQ86V81 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ALYREFQ86V81 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
ALYREFQ86V81 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ALYREFQ86V81 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.09■□□□□ 0.81
ALYREFQ86V81 HLA-G-203ENST00000376818 1127 ntBASIC20.09■□□□□ 0.81
ALYREFQ86V81 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
ALYREFQ86V81 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ALYREFQ86V81 AC245052.3-201ENST00000450182 901 ntBASIC20.09■□□□□ 0.81
ALYREFQ86V81 AC009078.2-202ENST00000463353 338 ntBASIC20.09■□□□□ 0.81
ALYREFQ86V81 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.09■□□□□ 0.81
ALYREFQ86V81 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.09■□□□□ 0.81
ALYREFQ86V81 CKBP1-201ENST00000565489 1086 ntBASIC20.09■□□□□ 0.81
ALYREFQ86V81 PRELID1P1-202ENST00000567272 903 ntBASIC20.09■□□□□ 0.81
ALYREFQ86V81 SLC25A1P4-201ENST00000567977 778 ntBASIC20.09■□□□□ 0.81
ALYREFQ86V81 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.09■□□□□ 0.81
ALYREFQ86V81 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.09■□□□□ 0.81
ALYREFQ86V81 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.09■□□□□ 0.81
ALYREFQ86V81 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.09■□□□□ 0.81
ALYREFQ86V81 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ALYREFQ86V81 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
ALYREFQ86V81 AC125437.2-201ENST00000625180 2167 ntBASIC20.09■□□□□ 0.81
ALYREFQ86V81 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.09■□□□□ 0.81
ALYREFQ86V81 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ALYREFQ86V81 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.08■□□□□ 0.81
ALYREFQ86V81 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms