Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSMD2Q7Z408 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CSMD2Q7Z408 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
CSMD2Q7Z408 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.24■□□□□ 0.19
CSMD2Q7Z408 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.24■□□□□ 0.19
CSMD2Q7Z408 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.24■□□□□ 0.19
CSMD2Q7Z408 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CSMD2Q7Z408 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSMD2Q7Z408 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.24■□□□□ 0.19
CSMD2Q7Z408 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.24■□□□□ 0.19
CSMD2Q7Z408 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSMD2Q7Z408 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSMD2Q7Z408 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.24■□□□□ 0.19
CSMD2Q7Z408 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSMD2Q7Z408 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC16.24■□□□□ 0.19
CSMD2Q7Z408 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSMD2Q7Z408 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.24■□□□□ 0.19
CSMD2Q7Z408 AP005901.3-202ENST00000581653 237 ntBASIC16.24■□□□□ 0.19
CSMD2Q7Z408 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.24■□□□□ 0.19
CSMD2Q7Z408 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.24■□□□□ 0.19
CSMD2Q7Z408 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSMD2Q7Z408 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSMD2Q7Z408 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
CSMD2Q7Z408 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CSMD2Q7Z408 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSMD2Q7Z408 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CSMD2Q7Z408 FEM1AP4-201ENST00000443167 1987 ntBASIC16.23■□□□□ 0.19
CSMD2Q7Z408 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.23■□□□□ 0.19
CSMD2Q7Z408 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
CSMD2Q7Z408 PMS2P2-201ENST00000425039 1128 ntBASIC16.23■□□□□ 0.19
CSMD2Q7Z408 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CSMD2Q7Z408 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CSMD2Q7Z408 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.23■□□□□ 0.19
CSMD2Q7Z408 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.23■□□□□ 0.19
CSMD2Q7Z408 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CSMD2Q7Z408 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CSMD2Q7Z408 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.23■□□□□ 0.19
CSMD2Q7Z408 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CSMD2Q7Z408 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.23■□□□□ 0.19
CSMD2Q7Z408 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CSMD2Q7Z408 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSMD2Q7Z408 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSMD2Q7Z408 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.23■□□□□ 0.19
CSMD2Q7Z408 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.23■□□□□ 0.19
CSMD2Q7Z408 AL139424.1-201ENST00000607572 797 ntBASIC16.23■□□□□ 0.19
CSMD2Q7Z408 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.23■□□□□ 0.19
CSMD2Q7Z408 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CSMD2Q7Z408 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSMD2Q7Z408 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSMD2Q7Z408 AC034232.1-201ENST00000506026 1064 ntBASIC16.22■□□□□ 0.19
CSMD2Q7Z408 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSMD2Q7Z408 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.22■□□□□ 0.19
CSMD2Q7Z408 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSMD2Q7Z408 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSMD2Q7Z408 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSMD2Q7Z408 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSMD2Q7Z408 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSMD2Q7Z408 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CSMD2Q7Z408 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSMD2Q7Z408 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSMD2Q7Z408 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSMD2Q7Z408 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.22■□□□□ 0.19
CSMD2Q7Z408 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.22■□□□□ 0.19
CSMD2Q7Z408 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CSMD2Q7Z408 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CSMD2Q7Z408 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSMD2Q7Z408 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC16.22■□□□□ 0.19
CSMD2Q7Z408 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CSMD2Q7Z408 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.22■□□□□ 0.19
CSMD2Q7Z408 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSMD2Q7Z408 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CSMD2Q7Z408 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.22■□□□□ 0.19
CSMD2Q7Z408 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.22■□□□□ 0.19
CSMD2Q7Z408 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSMD2Q7Z408 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.22■□□□□ 0.19
CSMD2Q7Z408 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.22■□□□□ 0.19
CSMD2Q7Z408 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.22■□□□□ 0.19
CSMD2Q7Z408 AC092667.1-201ENST00000434301 2586 ntBASIC16.22■□□□□ 0.19
CSMD2Q7Z408 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSMD2Q7Z408 AC244015.2-201ENST00000616358 1861 ntBASIC16.21■□□□□ 0.19
CSMD2Q7Z408 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CSMD2Q7Z408 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CSMD2Q7Z408 TUB-203ENST00000534099 1759 ntTSL 2 BASIC16.21■□□□□ 0.19
CSMD2Q7Z408 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CSMD2Q7Z408 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.21■□□□□ 0.19
CSMD2Q7Z408 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.21■□□□□ 0.19
CSMD2Q7Z408 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.21■□□□□ 0.19
CSMD2Q7Z408 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CSMD2Q7Z408 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.21■□□□□ 0.19
CSMD2Q7Z408 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.21■□□□□ 0.19
CSMD2Q7Z408 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSMD2Q7Z408 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSMD2Q7Z408 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.21■□□□□ 0.19
CSMD2Q7Z408 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.21■□□□□ 0.19
CSMD2Q7Z408 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CSMD2Q7Z408 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSMD2Q7Z408 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.21■□□□□ 0.19
CSMD2Q7Z408 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.21■□□□□ 0.19
CSMD2Q7Z408 KRT8P26-201ENST00000534154 1276 ntBASIC16.21■□□□□ 0.19
CSMD2Q7Z408 AC099343.3-201ENST00000605834 2503 ntBASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms