Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
SCXQ7RTU7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SCXQ7RTU7 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SCXQ7RTU7 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SCXQ7RTU7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC12.7□□□□□ -0.38
SCXQ7RTU7 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SCXQ7RTU7 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SCXQ7RTU7 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SCXQ7RTU7 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SCXQ7RTU7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SCXQ7RTU7 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC12.7□□□□□ -0.38
SCXQ7RTU7 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
SCXQ7RTU7 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC12.7□□□□□ -0.38
SCXQ7RTU7 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC12.7□□□□□ -0.38
SCXQ7RTU7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SCXQ7RTU7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC12.7□□□□□ -0.38
SCXQ7RTU7 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SCXQ7RTU7 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SCXQ7RTU7 AL121829.2-201ENST00000620908 328 ntBASIC12.7□□□□□ -0.38
SCXQ7RTU7 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SCXQ7RTU7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC12.7□□□□□ -0.38
SCXQ7RTU7 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SCXQ7RTU7 AP005212.1-201ENST00000581547 1997 ntBASIC12.7□□□□□ -0.38
SCXQ7RTU7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SCXQ7RTU7 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SCXQ7RTU7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SCXQ7RTU7 LETM1P2-201ENST00000597330 2178 ntBASIC12.7□□□□□ -0.38
SCXQ7RTU7 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SCXQ7RTU7 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
SCXQ7RTU7 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
SCXQ7RTU7 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SCXQ7RTU7 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SCXQ7RTU7 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SCXQ7RTU7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC12.7□□□□□ -0.38
SCXQ7RTU7 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SCXQ7RTU7 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SCXQ7RTU7 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SCXQ7RTU7 AR-207ENST00000612010 3896 ntTSL 5 BASIC12.69□□□□□ -0.38
SCXQ7RTU7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
SCXQ7RTU7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SCXQ7RTU7 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC12.69□□□□□ -0.38
SCXQ7RTU7 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SCXQ7RTU7 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SCXQ7RTU7 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SCXQ7RTU7 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SCXQ7RTU7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
SCXQ7RTU7 SMG8-203ENST00000578922 2178 ntBASIC12.69□□□□□ -0.38
SCXQ7RTU7 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SCXQ7RTU7 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
SCXQ7RTU7 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SCXQ7RTU7 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SCXQ7RTU7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
SCXQ7RTU7 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC12.69□□□□□ -0.38
SCXQ7RTU7 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC12.69□□□□□ -0.38
SCXQ7RTU7 ECEL1P3-201ENST00000427961 737 ntBASIC12.69□□□□□ -0.38
SCXQ7RTU7 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC12.69□□□□□ -0.38
SCXQ7RTU7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC12.69□□□□□ -0.38
SCXQ7RTU7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC12.69□□□□□ -0.38
SCXQ7RTU7 BX088651.1-201ENST00000540551 451 ntBASIC12.69□□□□□ -0.38
SCXQ7RTU7 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC12.69□□□□□ -0.38
SCXQ7RTU7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC12.69□□□□□ -0.38
SCXQ7RTU7 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SCXQ7RTU7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC12.69□□□□□ -0.38
SCXQ7RTU7 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC12.69□□□□□ -0.38
SCXQ7RTU7 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC12.69□□□□□ -0.38
SCXQ7RTU7 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC12.69□□□□□ -0.38
SCXQ7RTU7 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC12.69□□□□□ -0.38
SCXQ7RTU7 AL121906.2-201ENST00000621597 723 ntBASIC12.69□□□□□ -0.38
SCXQ7RTU7 AC113410.3-201ENST00000623366 203 ntBASIC12.69□□□□□ -0.38
SCXQ7RTU7 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SCXQ7RTU7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC12.69□□□□□ -0.38
SCXQ7RTU7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SCXQ7RTU7 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC12.69□□□□□ -0.38
SCXQ7RTU7 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SCXQ7RTU7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC12.69□□□□□ -0.38
SCXQ7RTU7 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
SCXQ7RTU7 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
SCXQ7RTU7 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SCXQ7RTU7 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SCXQ7RTU7 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SCXQ7RTU7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC12.69□□□□□ -0.38
SCXQ7RTU7 AC004408.2-201ENST00000623613 2777 ntBASIC12.69□□□□□ -0.38
SCXQ7RTU7 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SCXQ7RTU7 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SCXQ7RTU7 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SCXQ7RTU7 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SCXQ7RTU7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SCXQ7RTU7 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC12.68□□□□□ -0.38
SCXQ7RTU7 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC12.68□□□□□ -0.38
SCXQ7RTU7 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SCXQ7RTU7 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SCXQ7RTU7 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SCXQ7RTU7 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SCXQ7RTU7 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SCXQ7RTU7 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SCXQ7RTU7 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
SCXQ7RTU7 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SCXQ7RTU7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC12.68□□□□□ -0.38
SCXQ7RTU7 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SCXQ7RTU7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms