Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC27A1Q6PCB7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.83■□□□□ 0.93
SLC27A1Q6PCB7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.83■□□□□ 0.93
SLC27A1Q6PCB7 TSPY23P-201ENST00000440136 739 ntBASIC20.83■□□□□ 0.93
SLC27A1Q6PCB7 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLC27A1Q6PCB7 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLC27A1Q6PCB7 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.93
SLC27A1Q6PCB7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.83■□□□□ 0.93
SLC27A1Q6PCB7 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.83■□□□□ 0.93
SLC27A1Q6PCB7 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.83■□□□□ 0.93
SLC27A1Q6PCB7 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLC27A1Q6PCB7 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SLC27A1Q6PCB7 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC27A1Q6PCB7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.83■□□□□ 0.92
SLC27A1Q6PCB7 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.83■□□□□ 0.92
SLC27A1Q6PCB7 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.83■□□□□ 0.92
SLC27A1Q6PCB7 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC27A1Q6PCB7 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SLC27A1Q6PCB7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC27A1Q6PCB7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.82■□□□□ 0.92
SLC27A1Q6PCB7 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.82■□□□□ 0.92
SLC27A1Q6PCB7 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.82■□□□□ 0.92
SLC27A1Q6PCB7 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC27A1Q6PCB7 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC27A1Q6PCB7 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.82■□□□□ 0.92
SLC27A1Q6PCB7 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC27A1Q6PCB7 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.82■□□□□ 0.92
SLC27A1Q6PCB7 AL049597.2-201ENST00000565575 961 ntBASIC20.82■□□□□ 0.92
SLC27A1Q6PCB7 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC27A1Q6PCB7 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC27A1Q6PCB7 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC27A1Q6PCB7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.82■□□□□ 0.92
SLC27A1Q6PCB7 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.82■□□□□ 0.92
SLC27A1Q6PCB7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.82■□□□□ 0.92
SLC27A1Q6PCB7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC27A1Q6PCB7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC27A1Q6PCB7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC27A1Q6PCB7 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.81■□□□□ 0.92
SLC27A1Q6PCB7 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC27A1Q6PCB7 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.81■□□□□ 0.92
SLC27A1Q6PCB7 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC27A1Q6PCB7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC27A1Q6PCB7 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
SLC27A1Q6PCB7 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC27A1Q6PCB7 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.81■□□□□ 0.92
SLC27A1Q6PCB7 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.81■□□□□ 0.92
SLC27A1Q6PCB7 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC27A1Q6PCB7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC27A1Q6PCB7 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.81■□□□□ 0.92
SLC27A1Q6PCB7 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC27A1Q6PCB7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.81■□□□□ 0.92
SLC27A1Q6PCB7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC27A1Q6PCB7 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC27A1Q6PCB7 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC27A1Q6PCB7 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC27A1Q6PCB7 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC27A1Q6PCB7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC27A1Q6PCB7 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SLC27A1Q6PCB7 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.8■□□□□ 0.92
SLC27A1Q6PCB7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC27A1Q6PCB7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC27A1Q6PCB7 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.8■□□□□ 0.92
SLC27A1Q6PCB7 AP003041.3-201ENST00000527151 707 ntBASIC20.8■□□□□ 0.92
SLC27A1Q6PCB7 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.8■□□□□ 0.92
SLC27A1Q6PCB7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC27A1Q6PCB7 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
SLC27A1Q6PCB7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
SLC27A1Q6PCB7 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.8■□□□□ 0.92
SLC27A1Q6PCB7 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.8■□□□□ 0.92
SLC27A1Q6PCB7 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC27A1Q6PCB7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC27A1Q6PCB7 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLC27A1Q6PCB7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLC27A1Q6PCB7 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.79■□□□□ 0.92
SLC27A1Q6PCB7 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC27A1Q6PCB7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
SLC27A1Q6PCB7 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC27A1Q6PCB7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC27A1Q6PCB7 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLC27A1Q6PCB7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SLC27A1Q6PCB7 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLC27A1Q6PCB7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SLC27A1Q6PCB7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.79■□□□□ 0.92
SLC27A1Q6PCB7 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC27A1Q6PCB7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC27A1Q6PCB7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.79■□□□□ 0.92
SLC27A1Q6PCB7 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.79■□□□□ 0.92
SLC27A1Q6PCB7 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.79■□□□□ 0.92
SLC27A1Q6PCB7 AC104076.2-201ENST00000448912 469 ntBASIC20.79■□□□□ 0.92
SLC27A1Q6PCB7 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC27A1Q6PCB7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.79■□□□□ 0.92
SLC27A1Q6PCB7 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.79■□□□□ 0.92
SLC27A1Q6PCB7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLC27A1Q6PCB7 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC27A1Q6PCB7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
SLC27A1Q6PCB7 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC27A1Q6PCB7 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC27A1Q6PCB7 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
SLC27A1Q6PCB7 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC27A1Q6PCB7 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms