Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NIPAL3Q6P499 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.49■□□□□ 0.39
NIPAL3Q6P499 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
NIPAL3Q6P499 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NIPAL3Q6P499 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.49■□□□□ 0.39
NIPAL3Q6P499 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NIPAL3Q6P499 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.49■□□□□ 0.39
NIPAL3Q6P499 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.49■□□□□ 0.39
NIPAL3Q6P499 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NIPAL3Q6P499 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NIPAL3Q6P499 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.49■□□□□ 0.39
NIPAL3Q6P499 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
NIPAL3Q6P499 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NIPAL3Q6P499 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
NIPAL3Q6P499 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.49■□□□□ 0.39
NIPAL3Q6P499 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.49■□□□□ 0.39
NIPAL3Q6P499 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NIPAL3Q6P499 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NIPAL3Q6P499 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NIPAL3Q6P499 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.48■□□□□ 0.39
NIPAL3Q6P499 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NIPAL3Q6P499 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.48■□□□□ 0.39
NIPAL3Q6P499 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NIPAL3Q6P499 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
NIPAL3Q6P499 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NIPAL3Q6P499 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NIPAL3Q6P499 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
NIPAL3Q6P499 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
NIPAL3Q6P499 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.48■□□□□ 0.39
NIPAL3Q6P499 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NIPAL3Q6P499 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NIPAL3Q6P499 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NIPAL3Q6P499 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.48■□□□□ 0.39
NIPAL3Q6P499 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NIPAL3Q6P499 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.48■□□□□ 0.39
NIPAL3Q6P499 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.48■□□□□ 0.39
NIPAL3Q6P499 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.48■□□□□ 0.39
NIPAL3Q6P499 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.48■□□□□ 0.39
NIPAL3Q6P499 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.48■□□□□ 0.39
NIPAL3Q6P499 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.48■□□□□ 0.39
NIPAL3Q6P499 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NIPAL3Q6P499 AC233263.1-201ENST00000578059 224 ntBASIC17.48■□□□□ 0.39
NIPAL3Q6P499 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NIPAL3Q6P499 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
NIPAL3Q6P499 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NIPAL3Q6P499 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NIPAL3Q6P499 TEX21P-204ENST00000641479 1693 ntBASIC17.48■□□□□ 0.39
NIPAL3Q6P499 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.48■□□□□ 0.39
NIPAL3Q6P499 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.48■□□□□ 0.39
NIPAL3Q6P499 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
NIPAL3Q6P499 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NIPAL3Q6P499 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NIPAL3Q6P499 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.47■□□□□ 0.39
NIPAL3Q6P499 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NIPAL3Q6P499 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NIPAL3Q6P499 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NIPAL3Q6P499 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NIPAL3Q6P499 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
NIPAL3Q6P499 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NIPAL3Q6P499 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NIPAL3Q6P499 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.47■□□□□ 0.39
NIPAL3Q6P499 AC073648.6-201ENST00000641589 218 ntBASIC17.47■□□□□ 0.39
NIPAL3Q6P499 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NIPAL3Q6P499 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NIPAL3Q6P499 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NIPAL3Q6P499 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.47■□□□□ 0.39
NIPAL3Q6P499 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.47■□□□□ 0.39
NIPAL3Q6P499 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
NIPAL3Q6P499 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NIPAL3Q6P499 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.47■□□□□ 0.39
NIPAL3Q6P499 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
NIPAL3Q6P499 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NIPAL3Q6P499 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NIPAL3Q6P499 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NIPAL3Q6P499 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
NIPAL3Q6P499 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NIPAL3Q6P499 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
NIPAL3Q6P499 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.47■□□□□ 0.39
NIPAL3Q6P499 AC141586.3-201ENST00000562166 1838 ntBASIC17.47■□□□□ 0.39
NIPAL3Q6P499 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NIPAL3Q6P499 AP006587.1-201ENST00000534129 1502 ntBASIC17.47■□□□□ 0.39
NIPAL3Q6P499 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
NIPAL3Q6P499 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
NIPAL3Q6P499 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NIPAL3Q6P499 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NIPAL3Q6P499 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
NIPAL3Q6P499 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
NIPAL3Q6P499 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
NIPAL3Q6P499 AL049812.1-201ENST00000432563 2267 ntBASIC17.46■□□□□ 0.39
NIPAL3Q6P499 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.46■□□□□ 0.39
NIPAL3Q6P499 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
NIPAL3Q6P499 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NIPAL3Q6P499 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
NIPAL3Q6P499 AC128676.1-201ENST00000454392 318 ntBASIC17.46■□□□□ 0.39
NIPAL3Q6P499 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
NIPAL3Q6P499 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NIPAL3Q6P499 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.46■□□□□ 0.39
NIPAL3Q6P499 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
NIPAL3Q6P499 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
NIPAL3Q6P499 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms