Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRNP1Q6NT89 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRNP1Q6NT89 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.05■□□□□ 0.8
TRNP1Q6NT89 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRNP1Q6NT89 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.05■□□□□ 0.8
TRNP1Q6NT89 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRNP1Q6NT89 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
TRNP1Q6NT89 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRNP1Q6NT89 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TRNP1Q6NT89 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRNP1Q6NT89 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRNP1Q6NT89 AC018445.3-201ENST00000624177 1945 ntBASIC20.04■□□□□ 0.8
TRNP1Q6NT89 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
TRNP1Q6NT89 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.04■□□□□ 0.8
TRNP1Q6NT89 AL135905.2-201ENST00000584934 1404 ntBASIC20.04■□□□□ 0.8
TRNP1Q6NT89 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRNP1Q6NT89 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
TRNP1Q6NT89 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRNP1Q6NT89 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.04■□□□□ 0.8
TRNP1Q6NT89 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.04■□□□□ 0.8
TRNP1Q6NT89 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.04■□□□□ 0.8
TRNP1Q6NT89 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.04■□□□□ 0.8
TRNP1Q6NT89 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRNP1Q6NT89 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRNP1Q6NT89 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.04■□□□□ 0.8
TRNP1Q6NT89 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.04■□□□□ 0.8
TRNP1Q6NT89 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRNP1Q6NT89 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TRNP1Q6NT89 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
TRNP1Q6NT89 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.03■□□□□ 0.8
TRNP1Q6NT89 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.03■□□□□ 0.8
TRNP1Q6NT89 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
TRNP1Q6NT89 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRNP1Q6NT89 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRNP1Q6NT89 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.03■□□□□ 0.8
TRNP1Q6NT89 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRNP1Q6NT89 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.03■□□□□ 0.8
TRNP1Q6NT89 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.03■□□□□ 0.8
TRNP1Q6NT89 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
TRNP1Q6NT89 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.03■□□□□ 0.8
TRNP1Q6NT89 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.03■□□□□ 0.8
TRNP1Q6NT89 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.03■□□□□ 0.8
TRNP1Q6NT89 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.03■□□□□ 0.8
TRNP1Q6NT89 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.03■□□□□ 0.8
TRNP1Q6NT89 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
TRNP1Q6NT89 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRNP1Q6NT89 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRNP1Q6NT89 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRNP1Q6NT89 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.02■□□□□ 0.8
TRNP1Q6NT89 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRNP1Q6NT89 KRT8P11-201ENST00000409686 1436 ntBASIC20.02■□□□□ 0.8
TRNP1Q6NT89 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRNP1Q6NT89 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
TRNP1Q6NT89 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRNP1Q6NT89 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRNP1Q6NT89 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRNP1Q6NT89 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TRNP1Q6NT89 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRNP1Q6NT89 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRNP1Q6NT89 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRNP1Q6NT89 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRNP1Q6NT89 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRNP1Q6NT89 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
TRNP1Q6NT89 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRNP1Q6NT89 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRNP1Q6NT89 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRNP1Q6NT89 B3GAT3P1-201ENST00000471720 806 ntBASIC20.02■□□□□ 0.8
TRNP1Q6NT89 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRNP1Q6NT89 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.02■□□□□ 0.8
TRNP1Q6NT89 AC026271.3-201ENST00000571884 352 ntBASIC20.02■□□□□ 0.8
TRNP1Q6NT89 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
TRNP1Q6NT89 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.02■□□□□ 0.8
TRNP1Q6NT89 AL031985.4-201ENST00000642138 673 ntBASIC20.02■□□□□ 0.8
TRNP1Q6NT89 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRNP1Q6NT89 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.02■□□□□ 0.8
TRNP1Q6NT89 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.02■□□□□ 0.8
TRNP1Q6NT89 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRNP1Q6NT89 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.02■□□□□ 0.79
TRNP1Q6NT89 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.02■□□□□ 0.79
TRNP1Q6NT89 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRNP1Q6NT89 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRNP1Q6NT89 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.01■□□□□ 0.79
TRNP1Q6NT89 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRNP1Q6NT89 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRNP1Q6NT89 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRNP1Q6NT89 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.01■□□□□ 0.79
TRNP1Q6NT89 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRNP1Q6NT89 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.01■□□□□ 0.79
TRNP1Q6NT89 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.01■□□□□ 0.79
TRNP1Q6NT89 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.01■□□□□ 0.79
TRNP1Q6NT89 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
TRNP1Q6NT89 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRNP1Q6NT89 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.01■□□□□ 0.79
TRNP1Q6NT89 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRNP1Q6NT89 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.01■□□□□ 0.79
TRNP1Q6NT89 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRNP1Q6NT89 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRNP1Q6NT89 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRNP1Q6NT89 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRNP1Q6NT89 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms