Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 AC073111.5-205ENST00000641717 521 ntBASIC18.16■□□□□ 0.5
RUNDC3AQ59EK9 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RUNDC3AQ59EK9 AP006587.1-201ENST00000534129 1502 ntBASIC18.16■□□□□ 0.5
RUNDC3AQ59EK9 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.16■□□□□ 0.5
RUNDC3AQ59EK9 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RUNDC3AQ59EK9 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RUNDC3AQ59EK9 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RUNDC3AQ59EK9 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RUNDC3AQ59EK9 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.16■□□□□ 0.5
RUNDC3AQ59EK9 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RUNDC3AQ59EK9 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RUNDC3AQ59EK9 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RUNDC3AQ59EK9 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.15■□□□□ 0.5
RUNDC3AQ59EK9 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.15■□□□□ 0.5
RUNDC3AQ59EK9 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RUNDC3AQ59EK9 AC135050.7-201ENST00000624508 2218 ntBASIC18.15■□□□□ 0.5
RUNDC3AQ59EK9 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RUNDC3AQ59EK9 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RUNDC3AQ59EK9 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RUNDC3AQ59EK9 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RUNDC3AQ59EK9 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.15■□□□□ 0.5
RUNDC3AQ59EK9 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RUNDC3AQ59EK9 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.15■□□□□ 0.5
RUNDC3AQ59EK9 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.15■□□□□ 0.5
RUNDC3AQ59EK9 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.15■□□□□ 0.5
RUNDC3AQ59EK9 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.15■□□□□ 0.5
RUNDC3AQ59EK9 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RUNDC3AQ59EK9 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.15■□□□□ 0.5
RUNDC3AQ59EK9 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.15■□□□□ 0.5
RUNDC3AQ59EK9 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RUNDC3AQ59EK9 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RUNDC3AQ59EK9 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
RUNDC3AQ59EK9 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.15■□□□□ 0.5
RUNDC3AQ59EK9 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
RUNDC3AQ59EK9 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.15■□□□□ 0.5
RUNDC3AQ59EK9 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RUNDC3AQ59EK9 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.15■□□□□ 0.5
RUNDC3AQ59EK9 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
RUNDC3AQ59EK9 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RUNDC3AQ59EK9 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RUNDC3AQ59EK9 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.14■□□□□ 0.5
RUNDC3AQ59EK9 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RUNDC3AQ59EK9 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
RUNDC3AQ59EK9 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.14■□□□□ 0.5
RUNDC3AQ59EK9 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
RUNDC3AQ59EK9 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RUNDC3AQ59EK9 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RUNDC3AQ59EK9 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RUNDC3AQ59EK9 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RUNDC3AQ59EK9 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RUNDC3AQ59EK9 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RUNDC3AQ59EK9 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.14■□□□□ 0.49
RUNDC3AQ59EK9 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RUNDC3AQ59EK9 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RUNDC3AQ59EK9 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RUNDC3AQ59EK9 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RUNDC3AQ59EK9 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.14■□□□□ 0.49
RUNDC3AQ59EK9 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.14■□□□□ 0.49
RUNDC3AQ59EK9 CDCA4P2-201ENST00000441182 718 ntBASIC18.14■□□□□ 0.49
RUNDC3AQ59EK9 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.14■□□□□ 0.49
RUNDC3AQ59EK9 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.14■□□□□ 0.49
RUNDC3AQ59EK9 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.14■□□□□ 0.49
RUNDC3AQ59EK9 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RUNDC3AQ59EK9 RAP2CP1-201ENST00000605103 478 ntBASIC18.14■□□□□ 0.49
RUNDC3AQ59EK9 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RUNDC3AQ59EK9 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.14■□□□□ 0.49
RUNDC3AQ59EK9 FEM1AP3-201ENST00000403722 1741 ntBASIC18.14■□□□□ 0.49
RUNDC3AQ59EK9 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RUNDC3AQ59EK9 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RUNDC3AQ59EK9 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RUNDC3AQ59EK9 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.14■□□□□ 0.49
RUNDC3AQ59EK9 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 MIPEPP3-201ENST00000412105 444 ntBASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 DUSP5P2-201ENST00000426873 1033 ntBASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
RUNDC3AQ59EK9 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms