Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHRFAM7AQ494W8 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRFAM7AQ494W8 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRFAM7AQ494W8 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.8■□□□□ 0.28
CHRFAM7AQ494W8 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRFAM7AQ494W8 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.8■□□□□ 0.28
CHRFAM7AQ494W8 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHRFAM7AQ494W8 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRFAM7AQ494W8 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.8■□□□□ 0.28
CHRFAM7AQ494W8 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRFAM7AQ494W8 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRFAM7AQ494W8 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRFAM7AQ494W8 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRFAM7AQ494W8 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CHRFAM7AQ494W8 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CHRFAM7AQ494W8 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.8■□□□□ 0.28
CHRFAM7AQ494W8 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.8■□□□□ 0.28
CHRFAM7AQ494W8 TMPOP1-202ENST00000424642 1267 ntBASIC16.8■□□□□ 0.28
CHRFAM7AQ494W8 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHRFAM7AQ494W8 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.8■□□□□ 0.28
CHRFAM7AQ494W8 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRFAM7AQ494W8 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
CHRFAM7AQ494W8 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.8■□□□□ 0.28
CHRFAM7AQ494W8 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CHRFAM7AQ494W8 AC110285.5-201ENST00000611501 352 ntBASIC16.8■□□□□ 0.28
CHRFAM7AQ494W8 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHRFAM7AQ494W8 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRFAM7AQ494W8 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.8■□□□□ 0.28
CHRFAM7AQ494W8 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.8■□□□□ 0.28
CHRFAM7AQ494W8 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHRFAM7AQ494W8 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRFAM7AQ494W8 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CHRFAM7AQ494W8 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHRFAM7AQ494W8 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRFAM7AQ494W8 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRFAM7AQ494W8 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CHRFAM7AQ494W8 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CHRFAM7AQ494W8 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
CHRFAM7AQ494W8 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHRFAM7AQ494W8 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.79■□□□□ 0.28
CHRFAM7AQ494W8 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRFAM7AQ494W8 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHRFAM7AQ494W8 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRFAM7AQ494W8 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.79■□□□□ 0.28
CHRFAM7AQ494W8 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRFAM7AQ494W8 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHRFAM7AQ494W8 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
CHRFAM7AQ494W8 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.79■□□□□ 0.28
CHRFAM7AQ494W8 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.79■□□□□ 0.28
CHRFAM7AQ494W8 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CHRFAM7AQ494W8 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHRFAM7AQ494W8 ARMC10P1-201ENST00000313754 855 ntBASIC16.79■□□□□ 0.28
CHRFAM7AQ494W8 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CHRFAM7AQ494W8 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHRFAM7AQ494W8 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CHRFAM7AQ494W8 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.79■□□□□ 0.28
CHRFAM7AQ494W8 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.79■□□□□ 0.28
CHRFAM7AQ494W8 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHRFAM7AQ494W8 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHRFAM7AQ494W8 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.79■□□□□ 0.28
CHRFAM7AQ494W8 CD177P1-201ENST00000606252 935 ntBASIC16.79■□□□□ 0.28
CHRFAM7AQ494W8 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CHRFAM7AQ494W8 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
CHRFAM7AQ494W8 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRFAM7AQ494W8 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.79■□□□□ 0.28
CHRFAM7AQ494W8 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.79■□□□□ 0.28
CHRFAM7AQ494W8 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRFAM7AQ494W8 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHRFAM7AQ494W8 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHRFAM7AQ494W8 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHRFAM7AQ494W8 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
CHRFAM7AQ494W8 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRFAM7AQ494W8 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CHRFAM7AQ494W8 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRFAM7AQ494W8 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHRFAM7AQ494W8 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.79■□□□□ 0.28
CHRFAM7AQ494W8 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CHRFAM7AQ494W8 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHRFAM7AQ494W8 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHRFAM7AQ494W8 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHRFAM7AQ494W8 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHRFAM7AQ494W8 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHRFAM7AQ494W8 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.78■□□□□ 0.28
CHRFAM7AQ494W8 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.78■□□□□ 0.28
CHRFAM7AQ494W8 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC16.78■□□□□ 0.28
CHRFAM7AQ494W8 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.78■□□□□ 0.28
CHRFAM7AQ494W8 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.78■□□□□ 0.28
CHRFAM7AQ494W8 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHRFAM7AQ494W8 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHRFAM7AQ494W8 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CHRFAM7AQ494W8 HTR7P1-202ENST00000624664 4411 ntBASIC16.78■□□□□ 0.28
CHRFAM7AQ494W8 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHRFAM7AQ494W8 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHRFAM7AQ494W8 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.78■□□□□ 0.28
CHRFAM7AQ494W8 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHRFAM7AQ494W8 PGM5P4-201ENST00000421970 445 ntBASIC16.78■□□□□ 0.28
CHRFAM7AQ494W8 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.78■□□□□ 0.28
CHRFAM7AQ494W8 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHRFAM7AQ494W8 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.78■□□□□ 0.28
CHRFAM7AQ494W8 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms