Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
ERCC6LQ2NKX8 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC6LQ2NKX8 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC6LQ2NKX8 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC6LQ2NKX8 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC6LQ2NKX8 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC6LQ2NKX8 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC6LQ2NKX8 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC6LQ2NKX8 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.35■□□□□ 0.85
ERCC6LQ2NKX8 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC6LQ2NKX8 LINC00896-202ENST00000609602 2128 ntBASIC20.35■□□□□ 0.85
ERCC6LQ2NKX8 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.35■□□□□ 0.85
ERCC6LQ2NKX8 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.35■□□□□ 0.85
ERCC6LQ2NKX8 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC6LQ2NKX8 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.35■□□□□ 0.85
ERCC6LQ2NKX8 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.35■□□□□ 0.85
ERCC6LQ2NKX8 AC106739.1-201ENST00000617035 715 ntBASIC20.35■□□□□ 0.85
ERCC6LQ2NKX8 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC6LQ2NKX8 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC6LQ2NKX8 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC6LQ2NKX8 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
ERCC6LQ2NKX8 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.35■□□□□ 0.85
ERCC6LQ2NKX8 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC6LQ2NKX8 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC6LQ2NKX8 KRT8P20-201ENST00000423953 1409 ntBASIC20.35■□□□□ 0.85
ERCC6LQ2NKX8 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC6LQ2NKX8 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC6LQ2NKX8 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC6LQ2NKX8 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC6LQ2NKX8 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC6LQ2NKX8 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC6LQ2NKX8 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.34■□□□□ 0.85
ERCC6LQ2NKX8 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
ERCC6LQ2NKX8 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC6LQ2NKX8 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
ERCC6LQ2NKX8 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC6LQ2NKX8 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
ERCC6LQ2NKX8 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC6LQ2NKX8 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC6LQ2NKX8 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC6LQ2NKX8 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC6LQ2NKX8 ANO7L1-203ENST00000602586 1720 ntBASIC20.34■□□□□ 0.85
ERCC6LQ2NKX8 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.34■□□□□ 0.85
ERCC6LQ2NKX8 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC6LQ2NKX8 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.34■□□□□ 0.85
ERCC6LQ2NKX8 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC6LQ2NKX8 AC008764.7-201ENST00000593779 1081 ntBASIC20.34■□□□□ 0.85
ERCC6LQ2NKX8 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.34■□□□□ 0.85
ERCC6LQ2NKX8 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.34■□□□□ 0.85
ERCC6LQ2NKX8 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.34■□□□□ 0.85
ERCC6LQ2NKX8 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC6LQ2NKX8 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC6LQ2NKX8 AC090340.1-201ENST00000620778 4980 ntBASIC20.34■□□□□ 0.85
ERCC6LQ2NKX8 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC6LQ2NKX8 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC6LQ2NKX8 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC6LQ2NKX8 IRX1P1-201ENST00000438849 1838 ntBASIC20.34■□□□□ 0.85
ERCC6LQ2NKX8 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.34■□□□□ 0.85
ERCC6LQ2NKX8 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC6LQ2NKX8 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC6LQ2NKX8 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.34■□□□□ 0.85
ERCC6LQ2NKX8 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC6LQ2NKX8 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.33■□□□□ 0.85
ERCC6LQ2NKX8 AC126763.1-201ENST00000552015 2118 ntBASIC20.33■□□□□ 0.85
ERCC6LQ2NKX8 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC6LQ2NKX8 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC6LQ2NKX8 TNRC18P3-201ENST00000441896 2691 ntBASIC20.33■□□□□ 0.85
ERCC6LQ2NKX8 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC6LQ2NKX8 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC6LQ2NKX8 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC6LQ2NKX8 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
ERCC6LQ2NKX8 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC6LQ2NKX8 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC6LQ2NKX8 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC6LQ2NKX8 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC6LQ2NKX8 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.33■□□□□ 0.85
ERCC6LQ2NKX8 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC6LQ2NKX8 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC6LQ2NKX8 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC6LQ2NKX8 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC6LQ2NKX8 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.33■□□□□ 0.85
ERCC6LQ2NKX8 AC110285.6-201ENST00000617652 491 ntBASIC20.33■□□□□ 0.85
ERCC6LQ2NKX8 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC6LQ2NKX8 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.33■□□□□ 0.84
ERCC6LQ2NKX8 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
ERCC6LQ2NKX8 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ERCC6LQ2NKX8 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
ERCC6LQ2NKX8 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
ERCC6LQ2NKX8 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
ERCC6LQ2NKX8 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ERCC6LQ2NKX8 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
ERCC6LQ2NKX8 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.33■□□□□ 0.84
ERCC6LQ2NKX8 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
ERCC6LQ2NKX8 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
ERCC6LQ2NKX8 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20.33■□□□□ 0.84
ERCC6LQ2NKX8 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ERCC6LQ2NKX8 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ERCC6LQ2NKX8 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ERCC6LQ2NKX8 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.32■□□□□ 0.84
ERCC6LQ2NKX8 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms