Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.52■□□□□ 0.56
HMGCS1Q01581 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMGCS1Q01581 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMGCS1Q01581 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HMGCS1Q01581 POM121L13P-201ENST00000422362 380 ntBASIC18.52■□□□□ 0.56
HMGCS1Q01581 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.52■□□□□ 0.56
HMGCS1Q01581 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HMGCS1Q01581 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.52■□□□□ 0.56
HMGCS1Q01581 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMGCS1Q01581 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.52■□□□□ 0.56
HMGCS1Q01581 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
HMGCS1Q01581 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
HMGCS1Q01581 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMGCS1Q01581 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
HMGCS1Q01581 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HMGCS1Q01581 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.52■□□□□ 0.55
HMGCS1Q01581 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HMGCS1Q01581 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.52■□□□□ 0.55
HMGCS1Q01581 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.52■□□□□ 0.55
HMGCS1Q01581 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HMGCS1Q01581 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HMGCS1Q01581 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HMGCS1Q01581 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
HMGCS1Q01581 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.51■□□□□ 0.55
HMGCS1Q01581 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HMGCS1Q01581 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HMGCS1Q01581 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HMGCS1Q01581 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
HMGCS1Q01581 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
HMGCS1Q01581 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HMGCS1Q01581 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HMGCS1Q01581 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
HMGCS1Q01581 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.51■□□□□ 0.55
HMGCS1Q01581 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HMGCS1Q01581 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HMGCS1Q01581 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.51■□□□□ 0.55
HMGCS1Q01581 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HMGCS1Q01581 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
HMGCS1Q01581 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.51■□□□□ 0.55
HMGCS1Q01581 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.51■□□□□ 0.55
HMGCS1Q01581 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.51■□□□□ 0.55
HMGCS1Q01581 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
HMGCS1Q01581 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.51■□□□□ 0.55
HMGCS1Q01581 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HMGCS1Q01581 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HMGCS1Q01581 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
HMGCS1Q01581 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.51■□□□□ 0.55
HMGCS1Q01581 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HMGCS1Q01581 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HMGCS1Q01581 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HMGCS1Q01581 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
HMGCS1Q01581 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
HMGCS1Q01581 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.5■□□□□ 0.55
HMGCS1Q01581 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.5■□□□□ 0.55
HMGCS1Q01581 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
HMGCS1Q01581 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
HMGCS1Q01581 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HMGCS1Q01581 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
HMGCS1Q01581 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.5■□□□□ 0.55
HMGCS1Q01581 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMGCS1Q01581 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HMGCS1Q01581 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
HMGCS1Q01581 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.5■□□□□ 0.55
HMGCS1Q01581 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.5■□□□□ 0.55
HMGCS1Q01581 KRT18P6-201ENST00000555540 1265 ntBASIC18.5■□□□□ 0.55
HMGCS1Q01581 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMGCS1Q01581 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.5■□□□□ 0.55
HMGCS1Q01581 AC008403.3-201ENST00000598924 454 ntBASIC18.5■□□□□ 0.55
HMGCS1Q01581 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.5■□□□□ 0.55
HMGCS1Q01581 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.5■□□□□ 0.55
HMGCS1Q01581 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.5■□□□□ 0.55
HMGCS1Q01581 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMGCS1Q01581 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.5■□□□□ 0.55
HMGCS1Q01581 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMGCS1Q01581 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMGCS1Q01581 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
HMGCS1Q01581 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.5■□□□□ 0.55
HMGCS1Q01581 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMGCS1Q01581 FP475955.4-201ENST00000623131 1990 ntBASIC18.5■□□□□ 0.55
HMGCS1Q01581 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.49■□□□□ 0.55
HMGCS1Q01581 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
HMGCS1Q01581 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMGCS1Q01581 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMGCS1Q01581 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
HMGCS1Q01581 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HMGCS1Q01581 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
HMGCS1Q01581 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.49■□□□□ 0.55
HMGCS1Q01581 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMGCS1Q01581 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
HMGCS1Q01581 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HMGCS1Q01581 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.49■□□□□ 0.55
HMGCS1Q01581 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HMGCS1Q01581 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.49■□□□□ 0.55
HMGCS1Q01581 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HMGCS1Q01581 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.49■□□□□ 0.55
HMGCS1Q01581 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.49■□□□□ 0.55
HMGCS1Q01581 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMGCS1Q01581 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMGCS1Q01581 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMGCS1Q01581 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms