Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.37■□□□□ 0.69
PRAMEP78395 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.37■□□□□ 0.69
PRAMEP78395 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.37■□□□□ 0.69
PRAMEP78395 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEP78395 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
PRAMEP78395 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEP78395 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.37■□□□□ 0.69
PRAMEP78395 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.37■□□□□ 0.69
PRAMEP78395 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEP78395 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEP78395 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.37■□□□□ 0.69
PRAMEP78395 AC104417.2-201ENST00000562989 1793 ntBASIC19.37■□□□□ 0.69
PRAMEP78395 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRAMEP78395 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.36■□□□□ 0.69
PRAMEP78395 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRAMEP78395 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRAMEP78395 AC098818.2-201ENST00000564925 2320 ntBASIC19.36■□□□□ 0.69
PRAMEP78395 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.36■□□□□ 0.69
PRAMEP78395 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRAMEP78395 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PRAMEP78395 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.36■□□□□ 0.69
PRAMEP78395 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRAMEP78395 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRAMEP78395 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PRAMEP78395 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRAMEP78395 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRAMEP78395 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRAMEP78395 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRAMEP78395 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRAMEP78395 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PRAMEP78395 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.36■□□□□ 0.69
PRAMEP78395 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.36■□□□□ 0.69
PRAMEP78395 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.36■□□□□ 0.69
PRAMEP78395 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PRAMEP78395 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.36■□□□□ 0.69
PRAMEP78395 AL023875.1-201ENST00000640777 796 ntBASIC19.36■□□□□ 0.69
PRAMEP78395 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.36■□□□□ 0.69
PRAMEP78395 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRAMEP78395 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.36■□□□□ 0.69
PRAMEP78395 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRAMEP78395 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRAMEP78395 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.36■□□□□ 0.69
PRAMEP78395 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PRAMEP78395 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.36■□□□□ 0.69
PRAMEP78395 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.35■□□□□ 0.69
PRAMEP78395 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRAMEP78395 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRAMEP78395 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PRAMEP78395 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
PRAMEP78395 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.35■□□□□ 0.69
PRAMEP78395 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRAMEP78395 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PRAMEP78395 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRAMEP78395 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRAMEP78395 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PRAMEP78395 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PRAMEP78395 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRAMEP78395 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRAMEP78395 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRAMEP78395 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PRAMEP78395 KRASP1-201ENST00000407852 552 ntBASIC19.35■□□□□ 0.69
PRAMEP78395 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
PRAMEP78395 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRAMEP78395 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.35■□□□□ 0.69
PRAMEP78395 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.35■□□□□ 0.69
PRAMEP78395 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRAMEP78395 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.35■□□□□ 0.69
PRAMEP78395 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.35■□□□□ 0.69
PRAMEP78395 AC020763.4-201ENST00000623414 4170 ntBASIC19.35■□□□□ 0.69
PRAMEP78395 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRAMEP78395 AP000974.1-201ENST00000623909 2387 ntBASIC19.35■□□□□ 0.69
PRAMEP78395 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.35■□□□□ 0.69
PRAMEP78395 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRAMEP78395 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRAMEP78395 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.35■□□□□ 0.69
PRAMEP78395 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
PRAMEP78395 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRAMEP78395 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRAMEP78395 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.35■□□□□ 0.69
PRAMEP78395 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PRAMEP78395 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PRAMEP78395 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.35■□□□□ 0.69
PRAMEP78395 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRAMEP78395 BX323043.1-201ENST00000641006 1765 ntBASIC19.34■□□□□ 0.69
PRAMEP78395 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRAMEP78395 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PRAMEP78395 SDHAP1-207ENST00000440850 2000 ntBASIC19.34■□□□□ 0.69
PRAMEP78395 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.34■□□□□ 0.69
PRAMEP78395 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.34■□□□□ 0.69
PRAMEP78395 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRAMEP78395 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.34■□□□□ 0.69
PRAMEP78395 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRAMEP78395 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRAMEP78395 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRAMEP78395 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.34■□□□□ 0.69
PRAMEP78395 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
PRAMEP78395 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.34■□□□□ 0.69
PRAMEP78395 AC006058.3-201ENST00000606217 1069 ntBASIC19.34■□□□□ 0.69
PRAMEP78395 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.34■□□□□ 0.69
PRAMEP78395 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms