Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACTA1P68133 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
ACTA1P68133 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
ACTA1P68133 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.13■□□□□ 0.33
ACTA1P68133 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.13■□□□□ 0.33
ACTA1P68133 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.13■□□□□ 0.33
ACTA1P68133 AC104417.2-201ENST00000562989 1793 ntBASIC17.13■□□□□ 0.33
ACTA1P68133 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ACTA1P68133 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.13■□□□□ 0.33
ACTA1P68133 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.13■□□□□ 0.33
ACTA1P68133 AC093787.1-201ENST00000450396 207 ntBASIC17.13■□□□□ 0.33
ACTA1P68133 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.13■□□□□ 0.33
ACTA1P68133 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.13■□□□□ 0.33
ACTA1P68133 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.13■□□□□ 0.33
ACTA1P68133 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.13■□□□□ 0.33
ACTA1P68133 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACTA1P68133 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACTA1P68133 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACTA1P68133 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ACTA1P68133 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACTA1P68133 AL390961.4-201ENST00000623958 2535 ntBASIC17.13■□□□□ 0.33
ACTA1P68133 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACTA1P68133 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.13■□□□□ 0.33
ACTA1P68133 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ACTA1P68133 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
ACTA1P68133 AC104581.1-202ENST00000635932 2618 ntBASIC17.13■□□□□ 0.33
ACTA1P68133 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.13■□□□□ 0.33
ACTA1P68133 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACTA1P68133 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACTA1P68133 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.13■□□□□ 0.33
ACTA1P68133 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.13■□□□□ 0.33
ACTA1P68133 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ACTA1P68133 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
ACTA1P68133 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.12■□□□□ 0.33
ACTA1P68133 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTA1P68133 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTA1P68133 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ACTA1P68133 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ACTA1P68133 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTA1P68133 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.12■□□□□ 0.33
ACTA1P68133 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTA1P68133 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ACTA1P68133 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.12■□□□□ 0.33
ACTA1P68133 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTA1P68133 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTA1P68133 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.12■□□□□ 0.33
ACTA1P68133 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTA1P68133 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.12■□□□□ 0.33
ACTA1P68133 AC022517.1-201ENST00000592429 346 ntBASIC17.12■□□□□ 0.33
ACTA1P68133 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTA1P68133 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTA1P68133 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
ACTA1P68133 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ACTA1P68133 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACTA1P68133 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ACTA1P68133 SDHAP1-207ENST00000440850 2000 ntBASIC17.11■□□□□ 0.33
ACTA1P68133 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ACTA1P68133 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ACTA1P68133 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ACTA1P68133 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ACTA1P68133 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.11■□□□□ 0.33
ACTA1P68133 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.11■□□□□ 0.33
ACTA1P68133 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
ACTA1P68133 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.11■□□□□ 0.33
ACTA1P68133 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ACTA1P68133 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ACTA1P68133 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.11■□□□□ 0.33
ACTA1P68133 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.11■□□□□ 0.33
ACTA1P68133 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ACTA1P68133 AL512353.2-201ENST00000448759 1962 ntBASIC17.11■□□□□ 0.33
ACTA1P68133 KRT8P8-201ENST00000434750 1448 ntBASIC17.11■□□□□ 0.33
ACTA1P68133 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ACTA1P68133 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ACTA1P68133 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.11■□□□□ 0.33
ACTA1P68133 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ACTA1P68133 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ACTA1P68133 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ACTA1P68133 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
ACTA1P68133 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ACTA1P68133 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.1■□□□□ 0.33
ACTA1P68133 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ACTA1P68133 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ACTA1P68133 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ACTA1P68133 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.1■□□□□ 0.33
ACTA1P68133 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ACTA1P68133 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.1■□□□□ 0.33
ACTA1P68133 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.1■□□□□ 0.33
ACTA1P68133 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ACTA1P68133 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ACTA1P68133 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ACTA1P68133 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ACTA1P68133 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.1■□□□□ 0.33
ACTA1P68133 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ACTA1P68133 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.1■□□□□ 0.33
ACTA1P68133 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.1■□□□□ 0.33
ACTA1P68133 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.1■□□□□ 0.33
ACTA1P68133 AC005829.2-201ENST00000571422 1056 ntBASIC17.1■□□□□ 0.33
ACTA1P68133 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.1■□□□□ 0.33
ACTA1P68133 AC005181.1-201ENST00000604782 1256 ntBASIC17.1■□□□□ 0.33
ACTA1P68133 RAP2CP1-201ENST00000605103 478 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms