Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRA2BP62995 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRA2BP62995 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TRA2BP62995 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRA2BP62995 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRA2BP62995 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRA2BP62995 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRA2BP62995 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.15■□□□□ 0.5
TRA2BP62995 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRA2BP62995 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRA2BP62995 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TRA2BP62995 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TRA2BP62995 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRA2BP62995 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
TRA2BP62995 AC098818.2-201ENST00000564925 2320 ntBASIC18.15■□□□□ 0.5
TRA2BP62995 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRA2BP62995 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRA2BP62995 KRT18P29-201ENST00000397031 1267 ntBASIC18.15■□□□□ 0.5
TRA2BP62995 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRA2BP62995 AP002982.1-201ENST00000492365 877 ntBASIC18.15■□□□□ 0.5
TRA2BP62995 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
TRA2BP62995 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRA2BP62995 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.15■□□□□ 0.5
TRA2BP62995 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRA2BP62995 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRA2BP62995 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRA2BP62995 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TRA2BP62995 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.14■□□□□ 0.49
TRA2BP62995 KRT8P41-201ENST00000533985 1514 ntBASIC18.14■□□□□ 0.49
TRA2BP62995 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRA2BP62995 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRA2BP62995 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRA2BP62995 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRA2BP62995 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRA2BP62995 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRA2BP62995 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRA2BP62995 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRA2BP62995 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.14■□□□□ 0.49
TRA2BP62995 TSPY20P-201ENST00000450910 630 ntBASIC18.14■□□□□ 0.49
TRA2BP62995 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.14■□□□□ 0.49
TRA2BP62995 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRA2BP62995 Z85996.1-201ENST00000494644 937 ntBASIC18.14■□□□□ 0.49
TRA2BP62995 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRA2BP62995 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRA2BP62995 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.14■□□□□ 0.49
TRA2BP62995 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.14■□□□□ 0.49
TRA2BP62995 AL359736.2-201ENST00000621992 437 ntBASIC18.14■□□□□ 0.49
TRA2BP62995 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRA2BP62995 TNXA-203ENST00000507684 2038 ntBASIC18.14■□□□□ 0.49
TRA2BP62995 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRA2BP62995 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRA2BP62995 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRA2BP62995 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRA2BP62995 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRA2BP62995 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
TRA2BP62995 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRA2BP62995 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRA2BP62995 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
TRA2BP62995 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.14■□□□□ 0.49
TRA2BP62995 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRA2BP62995 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRA2BP62995 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRA2BP62995 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.13■□□□□ 0.49
TRA2BP62995 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRA2BP62995 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRA2BP62995 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRA2BP62995 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRA2BP62995 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRA2BP62995 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRA2BP62995 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRA2BP62995 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TRA2BP62995 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.13■□□□□ 0.49
TRA2BP62995 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.13■□□□□ 0.49
TRA2BP62995 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.13■□□□□ 0.49
TRA2BP62995 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.13■□□□□ 0.49
TRA2BP62995 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.13■□□□□ 0.49
TRA2BP62995 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
TRA2BP62995 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.13■□□□□ 0.49
TRA2BP62995 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRA2BP62995 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRA2BP62995 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRA2BP62995 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
TRA2BP62995 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRA2BP62995 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.13■□□□□ 0.49
TRA2BP62995 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRA2BP62995 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRA2BP62995 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRA2BP62995 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TRA2BP62995 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.12■□□□□ 0.49
TRA2BP62995 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.12■□□□□ 0.49
TRA2BP62995 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRA2BP62995 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.12■□□□□ 0.49
TRA2BP62995 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRA2BP62995 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRA2BP62995 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRA2BP62995 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRA2BP62995 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRA2BP62995 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRA2BP62995 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRA2BP62995 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms