Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.8■□□□□ 0.28
SEC61A1P61619 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SEC61A1P61619 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.8■□□□□ 0.28
SEC61A1P61619 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.8■□□□□ 0.28
SEC61A1P61619 AC006557.6-201ENST00000623071 864 ntBASIC16.8■□□□□ 0.28
SEC61A1P61619 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SEC61A1P61619 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
SEC61A1P61619 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.8■□□□□ 0.28
SEC61A1P61619 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SEC61A1P61619 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
SEC61A1P61619 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.8■□□□□ 0.28
SEC61A1P61619 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SEC61A1P61619 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SEC61A1P61619 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.8■□□□□ 0.28
SEC61A1P61619 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.8■□□□□ 0.28
SEC61A1P61619 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SEC61A1P61619 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.8■□□□□ 0.28
SEC61A1P61619 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SEC61A1P61619 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SEC61A1P61619 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SEC61A1P61619 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SEC61A1P61619 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SEC61A1P61619 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.79■□□□□ 0.28
SEC61A1P61619 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SEC61A1P61619 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SEC61A1P61619 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.79■□□□□ 0.28
SEC61A1P61619 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.79■□□□□ 0.28
SEC61A1P61619 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
SEC61A1P61619 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SEC61A1P61619 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SEC61A1P61619 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SEC61A1P61619 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SEC61A1P61619 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SEC61A1P61619 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SEC61A1P61619 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SEC61A1P61619 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SEC61A1P61619 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SEC61A1P61619 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.79■□□□□ 0.28
SEC61A1P61619 RPS2P52-201ENST00000469610 820 ntBASIC16.79■□□□□ 0.28
SEC61A1P61619 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.79■□□□□ 0.28
SEC61A1P61619 AC233263.1-201ENST00000578059 224 ntBASIC16.79■□□□□ 0.28
SEC61A1P61619 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.79■□□□□ 0.28
SEC61A1P61619 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SEC61A1P61619 AC066615.1-201ENST00000640911 628 ntBASIC16.79■□□□□ 0.28
SEC61A1P61619 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SEC61A1P61619 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SEC61A1P61619 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SEC61A1P61619 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SEC61A1P61619 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SEC61A1P61619 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SEC61A1P61619 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.79■□□□□ 0.28
SEC61A1P61619 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SEC61A1P61619 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SEC61A1P61619 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.79■□□□□ 0.28
SEC61A1P61619 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC16.79■□□□□ 0.28
SEC61A1P61619 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SEC61A1P61619 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SEC61A1P61619 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SEC61A1P61619 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
SEC61A1P61619 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SEC61A1P61619 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.78■□□□□ 0.28
SEC61A1P61619 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.78■□□□□ 0.28
SEC61A1P61619 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SEC61A1P61619 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SEC61A1P61619 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SEC61A1P61619 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SEC61A1P61619 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SEC61A1P61619 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SEC61A1P61619 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SEC61A1P61619 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SEC61A1P61619 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.78■□□□□ 0.28
SEC61A1P61619 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.78■□□□□ 0.28
SEC61A1P61619 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SEC61A1P61619 FZD10-202ENST00000539839 3282 ntBASIC16.78■□□□□ 0.28
SEC61A1P61619 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SEC61A1P61619 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SEC61A1P61619 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SEC61A1P61619 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SEC61A1P61619 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SEC61A1P61619 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.78■□□□□ 0.28
SEC61A1P61619 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.78■□□□□ 0.28
SEC61A1P61619 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SEC61A1P61619 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.77■□□□□ 0.28
SEC61A1P61619 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SEC61A1P61619 AL691432.2-201ENST00000607222 2038 ntBASIC16.77■□□□□ 0.28
SEC61A1P61619 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.77■□□□□ 0.28
SEC61A1P61619 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.77■□□□□ 0.28
SEC61A1P61619 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SEC61A1P61619 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SEC61A1P61619 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SEC61A1P61619 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SEC61A1P61619 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SEC61A1P61619 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.77■□□□□ 0.28
SEC61A1P61619 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.77■□□□□ 0.28
SEC61A1P61619 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SEC61A1P61619 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.77■□□□□ 0.28
SEC61A1P61619 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.28
SEC61A1P61619 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SEC61A1P61619 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SEC61A1P61619 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms