Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.1■□□□□ 0.49
RAB38P57729 AL032819.2-201ENST00000624543 2162 ntBASIC18.1■□□□□ 0.49
RAB38P57729 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB38P57729 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB38P57729 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RAB38P57729 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RAB38P57729 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB38P57729 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.1■□□□□ 0.49
RAB38P57729 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB38P57729 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RAB38P57729 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.1■□□□□ 0.49
RAB38P57729 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB38P57729 TSPY21P-201ENST00000433481 731 ntBASIC18.1■□□□□ 0.49
RAB38P57729 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.1■□□□□ 0.49
RAB38P57729 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.1■□□□□ 0.49
RAB38P57729 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB38P57729 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RAB38P57729 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB38P57729 AC116562.4-201ENST00000641316 2276 ntBASIC18.1■□□□□ 0.49
RAB38P57729 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.1■□□□□ 0.49
RAB38P57729 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RAB38P57729 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.1■□□□□ 0.49
RAB38P57729 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB38P57729 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB38P57729 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAB38P57729 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
RAB38P57729 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAB38P57729 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAB38P57729 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAB38P57729 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAB38P57729 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAB38P57729 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
RAB38P57729 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.09■□□□□ 0.49
RAB38P57729 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAB38P57729 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
RAB38P57729 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RAB38P57729 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.09■□□□□ 0.49
RAB38P57729 FAM207BP-201ENST00000447172 505 ntBASIC18.09■□□□□ 0.49
RAB38P57729 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
RAB38P57729 DGCR10-201ENST00000609839 495 ntBASIC18.09■□□□□ 0.49
RAB38P57729 AC005332.7-201ENST00000614046 2005 ntBASIC18.09■□□□□ 0.49
RAB38P57729 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAB38P57729 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RAB38P57729 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAB38P57729 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
RAB38P57729 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RAB38P57729 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RAB38P57729 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
RAB38P57729 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RAB38P57729 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
RAB38P57729 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
RAB38P57729 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.08■□□□□ 0.48
RAB38P57729 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.08■□□□□ 0.48
RAB38P57729 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
RAB38P57729 AC008040.2-201ENST00000461049 708 ntBASIC18.08■□□□□ 0.48
RAB38P57729 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
RAB38P57729 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.08■□□□□ 0.48
RAB38P57729 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.08■□□□□ 0.48
RAB38P57729 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.08■□□□□ 0.48
RAB38P57729 TEX21P-204ENST00000641479 1693 ntBASIC18.08■□□□□ 0.48
RAB38P57729 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RAB38P57729 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
RAB38P57729 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RAB38P57729 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RAB38P57729 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RAB38P57729 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
RAB38P57729 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB38P57729 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB38P57729 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
RAB38P57729 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB38P57729 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB38P57729 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB38P57729 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB38P57729 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB38P57729 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB38P57729 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RAB38P57729 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.07■□□□□ 0.48
RAB38P57729 TSPY23P-201ENST00000440136 739 ntBASIC18.07■□□□□ 0.48
RAB38P57729 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
RAB38P57729 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.07■□□□□ 0.48
RAB38P57729 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.07■□□□□ 0.48
RAB38P57729 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.07■□□□□ 0.48
RAB38P57729 AP000692.2-201ENST00000608391 879 ntBASIC18.07■□□□□ 0.48
RAB38P57729 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.07■□□□□ 0.48
RAB38P57729 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RAB38P57729 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RAB38P57729 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB38P57729 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.07■□□□□ 0.48
RAB38P57729 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RAB38P57729 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB38P57729 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.07■□□□□ 0.48
RAB38P57729 AC141586.3-201ENST00000562166 1838 ntBASIC18.07■□□□□ 0.48
RAB38P57729 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB38P57729 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.07■□□□□ 0.48
RAB38P57729 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RAB38P57729 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB38P57729 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB38P57729 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RAB38P57729 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RAB38P57729 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms