Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC233702.5-201ENST00000584107 538 ntBASIC17.63■□□□□ 0.41
CLDN20P56880 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.63■□□□□ 0.41
CLDN20P56880 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CLDN20P56880 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.63■□□□□ 0.41
CLDN20P56880 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN20P56880 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN20P56880 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.63■□□□□ 0.41
CLDN20P56880 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.63■□□□□ 0.41
CLDN20P56880 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN20P56880 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN20P56880 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
CLDN20P56880 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN20P56880 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN20P56880 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN20P56880 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN20P56880 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.62■□□□□ 0.41
CLDN20P56880 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CLDN20P56880 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CLDN20P56880 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN20P56880 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN20P56880 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN20P56880 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.62■□□□□ 0.41
CLDN20P56880 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN20P56880 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN20P56880 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN20P56880 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN20P56880 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
CLDN20P56880 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CLDN20P56880 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.62■□□□□ 0.41
CLDN20P56880 AL596275.1-201ENST00000423464 877 ntBASIC17.62■□□□□ 0.41
CLDN20P56880 AC012618.2-201ENST00000428058 849 ntBASIC17.62■□□□□ 0.41
CLDN20P56880 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.62■□□□□ 0.41
CLDN20P56880 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.62■□□□□ 0.41
CLDN20P56880 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.62■□□□□ 0.41
CLDN20P56880 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN20P56880 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN20P56880 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.62■□□□□ 0.41
CLDN20P56880 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CLDN20P56880 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.62■□□□□ 0.41
CLDN20P56880 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.62■□□□□ 0.41
CLDN20P56880 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.62■□□□□ 0.41
CLDN20P56880 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.62■□□□□ 0.41
CLDN20P56880 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CLDN20P56880 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN20P56880 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.62■□□□□ 0.41
CLDN20P56880 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CLDN20P56880 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.62■□□□□ 0.41
CLDN20P56880 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.62■□□□□ 0.41
CLDN20P56880 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.62■□□□□ 0.41
CLDN20P56880 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.62■□□□□ 0.41
CLDN20P56880 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CLDN20P56880 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN20P56880 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN20P56880 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN20P56880 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN20P56880 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN20P56880 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.62■□□□□ 0.41
CLDN20P56880 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CLDN20P56880 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN20P56880 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN20P56880 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.61■□□□□ 0.41
CLDN20P56880 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CLDN20P56880 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN20P56880 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CLDN20P56880 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN20P56880 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN20P56880 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN20P56880 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN20P56880 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN20P56880 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN20P56880 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.61■□□□□ 0.41
CLDN20P56880 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.61■□□□□ 0.41
CLDN20P56880 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.61■□□□□ 0.41
CLDN20P56880 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN20P56880 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN20P56880 AL135905.2-201ENST00000584934 1404 ntBASIC17.61■□□□□ 0.41
CLDN20P56880 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.61■□□□□ 0.41
CLDN20P56880 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN20P56880 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN20P56880 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN20P56880 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN20P56880 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.6■□□□□ 0.41
CLDN20P56880 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
CLDN20P56880 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN20P56880 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN20P56880 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN20P56880 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN20P56880 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN20P56880 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN20P56880 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN20P56880 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CLDN20P56880 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.6■□□□□ 0.41
CLDN20P56880 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN20P56880 TUBB8P6-201ENST00000436895 1288 ntBASIC17.6■□□□□ 0.41
CLDN20P56880 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN20P56880 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.6■□□□□ 0.41
CLDN20P56880 AF186192.3-201ENST00000583427 947 ntBASIC17.6■□□□□ 0.41
CLDN20P56880 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.6■□□□□ 0.41
CLDN20P56880 AL049637.2-201ENST00000641778 930 ntBASIC17.6■□□□□ 0.41
CLDN20P56880 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms