Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOC4P55056 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC14.1□□□□□ -0.15
APOC4P55056 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOC4P55056 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC14.1□□□□□ -0.15
APOC4P55056 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC14.1□□□□□ -0.15
APOC4P55056 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC14.1□□□□□ -0.15
APOC4P55056 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOC4P55056 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOC4P55056 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC14.1□□□□□ -0.15
APOC4P55056 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
APOC4P55056 TSPY14P-201ENST00000303979 915 ntBASIC14.1□□□□□ -0.15
APOC4P55056 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC14.1□□□□□ -0.15
APOC4P55056 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOC4P55056 ATP5G1P1-201ENST00000448724 379 ntBASIC14.1□□□□□ -0.15
APOC4P55056 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC14.1□□□□□ -0.15
APOC4P55056 PRSS44-201ENST00000515154 1146 ntBASIC14.1□□□□□ -0.15
APOC4P55056 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC14.1□□□□□ -0.15
APOC4P55056 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
APOC4P55056 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
APOC4P55056 GPX4-207ENST00000589115 812 ntTSL 2 BASIC14.1□□□□□ -0.15
APOC4P55056 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC14.1□□□□□ -0.15
APOC4P55056 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
APOC4P55056 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOC4P55056 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
APOC4P55056 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOC4P55056 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOC4P55056 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC14.1□□□□□ -0.15
APOC4P55056 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
APOC4P55056 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
APOC4P55056 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOC4P55056 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
APOC4P55056 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC14.1□□□□□ -0.15
APOC4P55056 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOC4P55056 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
APOC4P55056 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
APOC4P55056 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOC4P55056 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC14.1□□□□□ -0.15
APOC4P55056 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.1□□□□□ -0.15
APOC4P55056 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
APOC4P55056 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
APOC4P55056 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
APOC4P55056 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC14.09□□□□□ -0.15
APOC4P55056 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC4P55056 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC4P55056 KRT8P9-201ENST00000558927 1449 ntBASIC14.09□□□□□ -0.15
APOC4P55056 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
APOC4P55056 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC14.09□□□□□ -0.15
APOC4P55056 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC4P55056 HIST1H2APS4-201ENST00000362070 348 ntBASIC14.09□□□□□ -0.15
APOC4P55056 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC4P55056 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
APOC4P55056 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
APOC4P55056 AL137013.1-201ENST00000432946 1228 ntBASIC14.09□□□□□ -0.15
APOC4P55056 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC14.09□□□□□ -0.15
APOC4P55056 TMA16-209ENST00000513272 803 ntTSL 2 BASIC14.09□□□□□ -0.15
APOC4P55056 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
APOC4P55056 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC14.09□□□□□ -0.15
APOC4P55056 AC010947.1-201ENST00000623454 693 ntBASIC14.09□□□□□ -0.15
APOC4P55056 CYP2D8P-201ENST00000433633 1490 ntBASIC14.09□□□□□ -0.15
APOC4P55056 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
APOC4P55056 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC4P55056 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC14.09□□□□□ -0.15
APOC4P55056 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
APOC4P55056 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC4P55056 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC4P55056 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC4P55056 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC4P55056 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
APOC4P55056 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC14.09□□□□□ -0.15
APOC4P55056 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
APOC4P55056 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
APOC4P55056 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
APOC4P55056 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
APOC4P55056 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
APOC4P55056 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC14.08□□□□□ -0.16
APOC4P55056 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
APOC4P55056 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC14.08□□□□□ -0.16
APOC4P55056 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOC4P55056 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOC4P55056 AC113347.1-201ENST00000413321 391 ntBASIC14.08□□□□□ -0.16
APOC4P55056 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC14.08□□□□□ -0.16
APOC4P55056 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC14.08□□□□□ -0.16
APOC4P55056 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC14.08□□□□□ -0.16
APOC4P55056 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC14.08□□□□□ -0.16
APOC4P55056 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
APOC4P55056 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC14.08□□□□□ -0.16
APOC4P55056 AL157384.1-201ENST00000445995 2473 ntBASIC14.08□□□□□ -0.16
APOC4P55056 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC14.08□□□□□ -0.16
APOC4P55056 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOC4P55056 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOC4P55056 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
APOC4P55056 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOC4P55056 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
APOC4P55056 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOC4P55056 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC14.07□□□□□ -0.16
APOC4P55056 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
APOC4P55056 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
APOC4P55056 ZNF815P-204ENST00000434898 1737 ntBASIC14.07□□□□□ -0.16
APOC4P55056 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
APOC4P55056 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms