Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.38■□□□□ 0.69
LIMK2P53671 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
LIMK2P53671 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LIMK2P53671 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LIMK2P53671 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LIMK2P53671 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LIMK2P53671 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LIMK2P53671 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LIMK2P53671 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.38■□□□□ 0.69
LIMK2P53671 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.38■□□□□ 0.69
LIMK2P53671 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.38■□□□□ 0.69
LIMK2P53671 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.38■□□□□ 0.69
LIMK2P53671 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LIMK2P53671 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.38■□□□□ 0.69
LIMK2P53671 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.38■□□□□ 0.69
LIMK2P53671 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LIMK2P53671 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
LIMK2P53671 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.38■□□□□ 0.69
LIMK2P53671 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LIMK2P53671 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LIMK2P53671 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
LIMK2P53671 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LIMK2P53671 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LIMK2P53671 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LIMK2P53671 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LIMK2P53671 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
LIMK2P53671 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.37■□□□□ 0.69
LIMK2P53671 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
LIMK2P53671 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LIMK2P53671 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.37■□□□□ 0.69
LIMK2P53671 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.37■□□□□ 0.69
LIMK2P53671 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.37■□□□□ 0.69
LIMK2P53671 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
LIMK2P53671 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
LIMK2P53671 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LIMK2P53671 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LIMK2P53671 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.37■□□□□ 0.69
LIMK2P53671 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LIMK2P53671 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
LIMK2P53671 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LIMK2P53671 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LIMK2P53671 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LIMK2P53671 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LIMK2P53671 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
LIMK2P53671 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.36■□□□□ 0.69
LIMK2P53671 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
LIMK2P53671 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LIMK2P53671 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.36■□□□□ 0.69
LIMK2P53671 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LIMK2P53671 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LIMK2P53671 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LIMK2P53671 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LIMK2P53671 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LIMK2P53671 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
LIMK2P53671 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.36■□□□□ 0.69
LIMK2P53671 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
LIMK2P53671 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LIMK2P53671 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.36■□□□□ 0.69
LIMK2P53671 PRKY-204ENST00000533551 1019 ntBASIC19.36■□□□□ 0.69
LIMK2P53671 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LIMK2P53671 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LIMK2P53671 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LIMK2P53671 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
LIMK2P53671 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
LIMK2P53671 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LIMK2P53671 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
LIMK2P53671 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
LIMK2P53671 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.36■□□□□ 0.69
LIMK2P53671 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
LIMK2P53671 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LIMK2P53671 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LIMK2P53671 AL135905.2-201ENST00000584934 1404 ntBASIC19.35■□□□□ 0.69
LIMK2P53671 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
LIMK2P53671 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LIMK2P53671 AL049812.1-201ENST00000432563 2267 ntBASIC19.35■□□□□ 0.69
LIMK2P53671 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.35■□□□□ 0.69
LIMK2P53671 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LIMK2P53671 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.35■□□□□ 0.69
LIMK2P53671 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.35■□□□□ 0.69
LIMK2P53671 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LIMK2P53671 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.35■□□□□ 0.69
LIMK2P53671 AP001412.1-201ENST00000608405 714 ntBASIC19.35■□□□□ 0.69
LIMK2P53671 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LIMK2P53671 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
LIMK2P53671 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LIMK2P53671 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LIMK2P53671 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
LIMK2P53671 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
LIMK2P53671 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LIMK2P53671 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LIMK2P53671 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LIMK2P53671 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
LIMK2P53671 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LIMK2P53671 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.34■□□□□ 0.69
LIMK2P53671 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.34■□□□□ 0.69
LIMK2P53671 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LIMK2P53671 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LIMK2P53671 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.34■□□□□ 0.69
LIMK2P53671 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
LIMK2P53671 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms