Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HTR3AP46098 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HTR3AP46098 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HTR3AP46098 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.74■□□□□ 0.43
HTR3AP46098 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HTR3AP46098 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HTR3AP46098 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.74■□□□□ 0.43
HTR3AP46098 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HTR3AP46098 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.74■□□□□ 0.43
HTR3AP46098 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.74■□□□□ 0.43
HTR3AP46098 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.74■□□□□ 0.43
HTR3AP46098 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.74■□□□□ 0.43
HTR3AP46098 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.74■□□□□ 0.43
HTR3AP46098 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.74■□□□□ 0.43
HTR3AP46098 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.74■□□□□ 0.43
HTR3AP46098 AC069544.1-201ENST00000609399 999 ntBASIC17.74■□□□□ 0.43
HTR3AP46098 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.74■□□□□ 0.43
HTR3AP46098 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.74■□□□□ 0.43
HTR3AP46098 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
HTR3AP46098 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HTR3AP46098 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HTR3AP46098 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
HTR3AP46098 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HTR3AP46098 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
HTR3AP46098 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HTR3AP46098 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.73■□□□□ 0.43
HTR3AP46098 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HTR3AP46098 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HTR3AP46098 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
HTR3AP46098 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HTR3AP46098 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
HTR3AP46098 TUBB8P6-201ENST00000436895 1288 ntBASIC17.73■□□□□ 0.43
HTR3AP46098 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.73■□□□□ 0.43
HTR3AP46098 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HTR3AP46098 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
HTR3AP46098 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.73■□□□□ 0.43
HTR3AP46098 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
HTR3AP46098 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HTR3AP46098 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HTR3AP46098 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.73■□□□□ 0.43
HTR3AP46098 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HTR3AP46098 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HTR3AP46098 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HTR3AP46098 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HTR3AP46098 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HTR3AP46098 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HTR3AP46098 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HTR3AP46098 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.72■□□□□ 0.43
HTR3AP46098 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HTR3AP46098 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
HTR3AP46098 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HTR3AP46098 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HTR3AP46098 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
HTR3AP46098 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
HTR3AP46098 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HTR3AP46098 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HTR3AP46098 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HTR3AP46098 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HTR3AP46098 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HTR3AP46098 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HTR3AP46098 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
HTR3AP46098 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
HTR3AP46098 KRT18P16-201ENST00000510337 1294 ntBASIC17.72■□□□□ 0.43
HTR3AP46098 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.72■□□□□ 0.43
HTR3AP46098 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.72■□□□□ 0.43
HTR3AP46098 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HTR3AP46098 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HTR3AP46098 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HTR3AP46098 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HTR3AP46098 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
HTR3AP46098 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.72■□□□□ 0.43
HTR3AP46098 KRT8P8-201ENST00000434750 1448 ntBASIC17.72■□□□□ 0.43
HTR3AP46098 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
HTR3AP46098 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
HTR3AP46098 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.71■□□□□ 0.43
HTR3AP46098 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HTR3AP46098 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
HTR3AP46098 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HTR3AP46098 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.71■□□□□ 0.43
HTR3AP46098 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HTR3AP46098 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
HTR3AP46098 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HTR3AP46098 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.71■□□□□ 0.43
HTR3AP46098 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.71■□□□□ 0.43
HTR3AP46098 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.71■□□□□ 0.43
HTR3AP46098 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.71■□□□□ 0.43
HTR3AP46098 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HTR3AP46098 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.71■□□□□ 0.43
HTR3AP46098 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.71■□□□□ 0.43
HTR3AP46098 MTDHP1-201ENST00000605323 784 ntBASIC17.71■□□□□ 0.43
HTR3AP46098 AC004264.1-201ENST00000608354 794 ntBASIC17.71■□□□□ 0.43
HTR3AP46098 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HTR3AP46098 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HTR3AP46098 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HTR3AP46098 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
HTR3AP46098 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
HTR3AP46098 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
HTR3AP46098 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.42
HTR3AP46098 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HTR3AP46098 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms