Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.71■□□□□ 0.59
EPHA3P29320 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.71■□□□□ 0.59
EPHA3P29320 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EPHA3P29320 AL133373.2-201ENST00000623187 2828 ntBASIC18.71■□□□□ 0.59
EPHA3P29320 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.71■□□□□ 0.59
EPHA3P29320 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EPHA3P29320 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.71■□□□□ 0.59
EPHA3P29320 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EPHA3P29320 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
EPHA3P29320 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.71■□□□□ 0.59
EPHA3P29320 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.71■□□□□ 0.59
EPHA3P29320 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.71■□□□□ 0.59
EPHA3P29320 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
EPHA3P29320 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.71■□□□□ 0.59
EPHA3P29320 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.71■□□□□ 0.59
EPHA3P29320 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.71■□□□□ 0.59
EPHA3P29320 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EPHA3P29320 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
EPHA3P29320 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
EPHA3P29320 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
EPHA3P29320 IRX1P1-201ENST00000438849 1838 ntBASIC18.7■□□□□ 0.58
EPHA3P29320 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EPHA3P29320 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EPHA3P29320 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.7■□□□□ 0.58
EPHA3P29320 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EPHA3P29320 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.7■□□□□ 0.58
EPHA3P29320 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EPHA3P29320 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EPHA3P29320 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EPHA3P29320 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
EPHA3P29320 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.7■□□□□ 0.58
EPHA3P29320 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EPHA3P29320 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
EPHA3P29320 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
EPHA3P29320 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
EPHA3P29320 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
EPHA3P29320 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
EPHA3P29320 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.7■□□□□ 0.58
EPHA3P29320 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.7■□□□□ 0.58
EPHA3P29320 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
EPHA3P29320 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
EPHA3P29320 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
EPHA3P29320 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.69■□□□□ 0.58
EPHA3P29320 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EPHA3P29320 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EPHA3P29320 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
EPHA3P29320 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.69■□□□□ 0.58
EPHA3P29320 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
EPHA3P29320 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
EPHA3P29320 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
EPHA3P29320 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
EPHA3P29320 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
EPHA3P29320 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EPHA3P29320 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
EPHA3P29320 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
EPHA3P29320 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
EPHA3P29320 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.69■□□□□ 0.58
EPHA3P29320 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
EPHA3P29320 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EPHA3P29320 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
EPHA3P29320 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
EPHA3P29320 AC079598.2-202ENST00000546624 1451 ntBASIC18.69■□□□□ 0.58
EPHA3P29320 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.69■□□□□ 0.58
EPHA3P29320 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
EPHA3P29320 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.69■□□□□ 0.58
EPHA3P29320 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.69■□□□□ 0.58
EPHA3P29320 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
EPHA3P29320 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.69■□□□□ 0.58
EPHA3P29320 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
EPHA3P29320 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
EPHA3P29320 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
EPHA3P29320 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.69■□□□□ 0.58
EPHA3P29320 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.68■□□□□ 0.58
EPHA3P29320 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EPHA3P29320 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
EPHA3P29320 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EPHA3P29320 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.68■□□□□ 0.58
EPHA3P29320 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.68■□□□□ 0.58
EPHA3P29320 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
EPHA3P29320 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.68■□□□□ 0.58
EPHA3P29320 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
EPHA3P29320 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.68■□□□□ 0.58
EPHA3P29320 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.68■□□□□ 0.58
EPHA3P29320 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.68■□□□□ 0.58
EPHA3P29320 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
EPHA3P29320 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
EPHA3P29320 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EPHA3P29320 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
EPHA3P29320 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EPHA3P29320 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
EPHA3P29320 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.68■□□□□ 0.58
EPHA3P29320 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.68■□□□□ 0.58
EPHA3P29320 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
EPHA3P29320 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
EPHA3P29320 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
EPHA3P29320 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
EPHA3P29320 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EPHA3P29320 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EPHA3P29320 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EPHA3P29320 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms