Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
VARSP26640 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VARSP26640 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VARSP26640 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VARSP26640 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VARSP26640 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VARSP26640 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
VARSP26640 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.87■□□□□ 0.61
VARSP26640 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.87■□□□□ 0.61
VARSP26640 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
VARSP26640 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
VARSP26640 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VARSP26640 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
VARSP26640 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
VARSP26640 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VARSP26640 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
VARSP26640 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VARSP26640 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
VARSP26640 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VARSP26640 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
VARSP26640 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
VARSP26640 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VARSP26640 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.87■□□□□ 0.61
VARSP26640 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VARSP26640 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VARSP26640 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VARSP26640 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.87■□□□□ 0.61
VARSP26640 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.87■□□□□ 0.61
VARSP26640 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VARSP26640 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.87■□□□□ 0.61
VARSP26640 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VARSP26640 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.86■□□□□ 0.61
VARSP26640 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VARSP26640 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.86■□□□□ 0.61
VARSP26640 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VARSP26640 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VARSP26640 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VARSP26640 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.86■□□□□ 0.61
VARSP26640 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.86■□□□□ 0.61
VARSP26640 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
VARSP26640 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
VARSP26640 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
VARSP26640 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.86■□□□□ 0.61
VARSP26640 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.86■□□□□ 0.61
VARSP26640 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VARSP26640 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.86■□□□□ 0.61
VARSP26640 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VARSP26640 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VARSP26640 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.86■□□□□ 0.61
VARSP26640 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
VARSP26640 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VARSP26640 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.86■□□□□ 0.61
VARSP26640 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.85■□□□□ 0.61
VARSP26640 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VARSP26640 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VARSP26640 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VARSP26640 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
VARSP26640 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VARSP26640 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.85■□□□□ 0.61
VARSP26640 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
VARSP26640 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VARSP26640 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.85■□□□□ 0.61
VARSP26640 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
VARSP26640 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
VARSP26640 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
VARSP26640 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VARSP26640 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VARSP26640 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VARSP26640 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VARSP26640 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.85■□□□□ 0.61
VARSP26640 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.85■□□□□ 0.61
VARSP26640 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VARSP26640 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.85■□□□□ 0.61
VARSP26640 LINC01023-201ENST00000606054 436 ntBASIC18.85■□□□□ 0.61
VARSP26640 AC069544.1-201ENST00000609399 999 ntBASIC18.85■□□□□ 0.61
VARSP26640 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VARSP26640 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VARSP26640 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.85■□□□□ 0.61
VARSP26640 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.85■□□□□ 0.61
VARSP26640 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
VARSP26640 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VARSP26640 AL032819.2-201ENST00000624543 2162 ntBASIC18.85■□□□□ 0.61
VARSP26640 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VARSP26640 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VARSP26640 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
VARSP26640 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.84■□□□□ 0.61
VARSP26640 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VARSP26640 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.84■□□□□ 0.61
VARSP26640 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VARSP26640 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.84■□□□□ 0.61
VARSP26640 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
VARSP26640 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VARSP26640 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VARSP26640 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VARSP26640 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VARSP26640 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.84■□□□□ 0.61
VARSP26640 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VARSP26640 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
VARSP26640 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
VARSP26640 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms