Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.59■□□□□ 0.25
CD40P25942 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD40P25942 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.59■□□□□ 0.25
CD40P25942 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.59■□□□□ 0.25
CD40P25942 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
CD40P25942 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CD40P25942 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD40P25942 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CD40P25942 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CD40P25942 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
CD40P25942 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
CD40P25942 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CD40P25942 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CD40P25942 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD40P25942 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CD40P25942 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD40P25942 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD40P25942 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD40P25942 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD40P25942 INGX-201ENST00000359239 846 ntBASIC16.59■□□□□ 0.25
CD40P25942 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CD40P25942 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
CD40P25942 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD40P25942 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.59■□□□□ 0.25
CD40P25942 LIN28AP1-201ENST00000429574 405 ntBASIC16.59■□□□□ 0.25
CD40P25942 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.59■□□□□ 0.25
CD40P25942 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CD40P25942 PRSS44-201ENST00000515154 1146 ntBASIC16.59■□□□□ 0.25
CD40P25942 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CD40P25942 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CD40P25942 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD40P25942 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CD40P25942 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CD40P25942 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD40P25942 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD40P25942 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.59■□□□□ 0.25
CD40P25942 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CD40P25942 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
CD40P25942 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CD40P25942 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
CD40P25942 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.58■□□□□ 0.25
CD40P25942 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CD40P25942 PCDHAC2-203ENST00000615316 3011 ntBASIC16.58■□□□□ 0.24
CD40P25942 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CD40P25942 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD40P25942 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD40P25942 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD40P25942 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.58■□□□□ 0.24
CD40P25942 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CD40P25942 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CD40P25942 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CD40P25942 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.58■□□□□ 0.24
CD40P25942 KRT18P57-201ENST00000443599 1254 ntBASIC16.58■□□□□ 0.24
CD40P25942 CA15P1-201ENST00000481698 905 ntBASIC16.58■□□□□ 0.24
CD40P25942 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CD40P25942 AC010331.1-201ENST00000611423 582 ntBASIC16.58■□□□□ 0.24
CD40P25942 FAM87A-204ENST00000613235 858 ntBASIC16.58■□□□□ 0.24
CD40P25942 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.58■□□□□ 0.24
CD40P25942 KRT8P11-201ENST00000409686 1436 ntBASIC16.58■□□□□ 0.24
CD40P25942 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.58■□□□□ 0.24
CD40P25942 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CD40P25942 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD40P25942 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CD40P25942 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD40P25942 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.58■□□□□ 0.24
CD40P25942 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CD40P25942 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD40P25942 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD40P25942 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD40P25942 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.57■□□□□ 0.24
CD40P25942 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD40P25942 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
CD40P25942 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CD40P25942 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD40P25942 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.57■□□□□ 0.24
CD40P25942 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.57■□□□□ 0.24
CD40P25942 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD40P25942 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CD40P25942 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CD40P25942 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.57■□□□□ 0.24
CD40P25942 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CD40P25942 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CD40P25942 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.57■□□□□ 0.24
CD40P25942 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
CD40P25942 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD40P25942 ATP5G1P1-201ENST00000448724 379 ntBASIC16.57■□□□□ 0.24
CD40P25942 TSPY17P-201ENST00000450329 467 ntBASIC16.57■□□□□ 0.24
CD40P25942 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.57■□□□□ 0.24
CD40P25942 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.57■□□□□ 0.24
CD40P25942 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.57■□□□□ 0.24
CD40P25942 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
CD40P25942 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CD40P25942 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD40P25942 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CD40P25942 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD40P25942 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD40P25942 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.56■□□□□ 0.24
CD40P25942 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD40P25942 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.56■□□□□ 0.24
CD40P25942 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms