Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AL158047.1-201ENST00000445918 881 ntBASIC18.5■□□□□ 0.55
CAPN3P20807 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.5■□□□□ 0.55
CAPN3P20807 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.5■□□□□ 0.55
CAPN3P20807 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN3P20807 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.5■□□□□ 0.55
CAPN3P20807 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN3P20807 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.5■□□□□ 0.55
CAPN3P20807 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN3P20807 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.5■□□□□ 0.55
CAPN3P20807 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN3P20807 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN3P20807 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN3P20807 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.5■□□□□ 0.55
CAPN3P20807 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN3P20807 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN3P20807 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN3P20807 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN3P20807 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN3P20807 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN3P20807 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.49■□□□□ 0.55
CAPN3P20807 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.49■□□□□ 0.55
CAPN3P20807 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN3P20807 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN3P20807 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CAPN3P20807 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CAPN3P20807 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CAPN3P20807 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CAPN3P20807 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
CAPN3P20807 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.49■□□□□ 0.55
CAPN3P20807 AL512625.2-201ENST00000417533 625 ntBASIC18.49■□□□□ 0.55
CAPN3P20807 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.49■□□□□ 0.55
CAPN3P20807 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.49■□□□□ 0.55
CAPN3P20807 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN3P20807 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.49■□□□□ 0.55
CAPN3P20807 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CAPN3P20807 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.49■□□□□ 0.55
CAPN3P20807 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.49■□□□□ 0.55
CAPN3P20807 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CAPN3P20807 WIZP1-201ENST00000531444 2299 ntBASIC18.49■□□□□ 0.55
CAPN3P20807 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.49■□□□□ 0.55
CAPN3P20807 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.49■□□□□ 0.55
CAPN3P20807 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN3P20807 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.49■□□□□ 0.55
CAPN3P20807 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.49■□□□□ 0.55
CAPN3P20807 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.49■□□□□ 0.55
CAPN3P20807 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.48■□□□□ 0.55
CAPN3P20807 LETM1P2-201ENST00000597330 2178 ntBASIC18.48■□□□□ 0.55
CAPN3P20807 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CAPN3P20807 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CAPN3P20807 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CAPN3P20807 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.48■□□□□ 0.55
CAPN3P20807 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CAPN3P20807 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.48■□□□□ 0.55
CAPN3P20807 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CAPN3P20807 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CAPN3P20807 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.48■□□□□ 0.55
CAPN3P20807 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CAPN3P20807 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CAPN3P20807 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.48■□□□□ 0.55
CAPN3P20807 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.48■□□□□ 0.55
CAPN3P20807 AC097658.1-201ENST00000475555 843 ntBASIC18.48■□□□□ 0.55
CAPN3P20807 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.48■□□□□ 0.55
CAPN3P20807 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.48■□□□□ 0.55
CAPN3P20807 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.48■□□□□ 0.55
CAPN3P20807 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CAPN3P20807 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CAPN3P20807 SDHAP1-207ENST00000440850 2000 ntBASIC18.48■□□□□ 0.55
CAPN3P20807 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.48■□□□□ 0.55
CAPN3P20807 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CAPN3P20807 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CAPN3P20807 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CAPN3P20807 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CAPN3P20807 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CAPN3P20807 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.48■□□□□ 0.55
CAPN3P20807 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CAPN3P20807 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CAPN3P20807 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CAPN3P20807 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.47■□□□□ 0.55
CAPN3P20807 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CAPN3P20807 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CAPN3P20807 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.47■□□□□ 0.55
CAPN3P20807 AC093525.10-201ENST00000625130 1569 ntBASIC18.47■□□□□ 0.55
CAPN3P20807 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.47■□□□□ 0.55
CAPN3P20807 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CAPN3P20807 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CAPN3P20807 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CAPN3P20807 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CAPN3P20807 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CAPN3P20807 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CAPN3P20807 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CAPN3P20807 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CAPN3P20807 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CAPN3P20807 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CAPN3P20807 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.47■□□□□ 0.55
CAPN3P20807 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.47■□□□□ 0.55
CAPN3P20807 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.47■□□□□ 0.55
CAPN3P20807 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.47■□□□□ 0.55
CAPN3P20807 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.47■□□□□ 0.55
CAPN3P20807 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.47■□□□□ 0.55
CAPN3P20807 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms