Protein–RNA interactions for Protein: P17787

CHRNB2, Neuronal acetylcholine receptor subunit beta-2, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB2P17787 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CHRNB2P17787 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.41■□□□□ 0.86
CHRNB2P17787 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CHRNB2P17787 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHRNB2P17787 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CHRNB2P17787 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHRNB2P17787 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CHRNB2P17787 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.41■□□□□ 0.86
CHRNB2P17787 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHRNB2P17787 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CHRNB2P17787 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CHRNB2P17787 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.41■□□□□ 0.86
CHRNB2P17787 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.41■□□□□ 0.86
CHRNB2P17787 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.41■□□□□ 0.86
CHRNB2P17787 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CHRNB2P17787 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.41■□□□□ 0.86
CHRNB2P17787 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHRNB2P17787 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHRNB2P17787 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CHRNB2P17787 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHRNB2P17787 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHRNB2P17787 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CHRNB2P17787 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHRNB2P17787 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHRNB2P17787 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHRNB2P17787 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CHRNB2P17787 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHRNB2P17787 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.4■□□□□ 0.86
CHRNB2P17787 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHRNB2P17787 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CHRNB2P17787 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.4■□□□□ 0.86
CHRNB2P17787 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.4■□□□□ 0.86
CHRNB2P17787 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CHRNB2P17787 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHRNB2P17787 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.4■□□□□ 0.86
CHRNB2P17787 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.4■□□□□ 0.86
CHRNB2P17787 AC110285.5-201ENST00000611501 352 ntBASIC20.4■□□□□ 0.86
CHRNB2P17787 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CHRNB2P17787 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.4■□□□□ 0.86
CHRNB2P17787 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.39■□□□□ 0.86
CHRNB2P17787 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHRNB2P17787 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.39■□□□□ 0.86
CHRNB2P17787 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
CHRNB2P17787 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHRNB2P17787 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CHRNB2P17787 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.39■□□□□ 0.85
CHRNB2P17787 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHRNB2P17787 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.39■□□□□ 0.85
CHRNB2P17787 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.39■□□□□ 0.85
CHRNB2P17787 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.39■□□□□ 0.85
CHRNB2P17787 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHRNB2P17787 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.39■□□□□ 0.85
CHRNB2P17787 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHRNB2P17787 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHRNB2P17787 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHRNB2P17787 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHRNB2P17787 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHRNB2P17787 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHRNB2P17787 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHRNB2P17787 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHRNB2P17787 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.38■□□□□ 0.85
CHRNB2P17787 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHRNB2P17787 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.38■□□□□ 0.85
CHRNB2P17787 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.38■□□□□ 0.85
CHRNB2P17787 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHRNB2P17787 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHRNB2P17787 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHRNB2P17787 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHRNB2P17787 TSPY23P-201ENST00000440136 739 ntBASIC20.38■□□□□ 0.85
CHRNB2P17787 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHRNB2P17787 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.38■□□□□ 0.85
CHRNB2P17787 Z85996.1-201ENST00000494644 937 ntBASIC20.38■□□□□ 0.85
CHRNB2P17787 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
CHRNB2P17787 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.38■□□□□ 0.85
CHRNB2P17787 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.38■□□□□ 0.85
CHRNB2P17787 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.38■□□□□ 0.85
CHRNB2P17787 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHRNB2P17787 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHRNB2P17787 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHRNB2P17787 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CHRNB2P17787 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHRNB2P17787 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHRNB2P17787 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHRNB2P17787 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNB2P17787 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CHRNB2P17787 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNB2P17787 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNB2P17787 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNB2P17787 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNB2P17787 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.37■□□□□ 0.85
CHRNB2P17787 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNB2P17787 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNB2P17787 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNB2P17787 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNB2P17787 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNB2P17787 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CHRNB2P17787 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHRNB2P17787 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.37■□□□□ 0.85
CHRNB2P17787 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.37■□□□□ 0.85
CHRNB2P17787 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms