Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.56■□□□□ 0.56
LINGO3P0C6S8 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.56■□□□□ 0.56
LINGO3P0C6S8 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.55■□□□□ 0.56
LINGO3P0C6S8 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.55■□□□□ 0.56
LINGO3P0C6S8 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINGO3P0C6S8 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.55■□□□□ 0.56
LINGO3P0C6S8 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINGO3P0C6S8 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINGO3P0C6S8 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINGO3P0C6S8 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.55■□□□□ 0.56
LINGO3P0C6S8 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINGO3P0C6S8 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINGO3P0C6S8 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINGO3P0C6S8 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINGO3P0C6S8 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.55■□□□□ 0.56
LINGO3P0C6S8 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINGO3P0C6S8 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
LINGO3P0C6S8 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.55■□□□□ 0.56
LINGO3P0C6S8 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LINGO3P0C6S8 MCRIP2P1-201ENST00000394346 511 ntBASIC18.55■□□□□ 0.56
LINGO3P0C6S8 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.55■□□□□ 0.56
LINGO3P0C6S8 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINGO3P0C6S8 AC105036.2-201ENST00000569468 176 ntBASIC18.55■□□□□ 0.56
LINGO3P0C6S8 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.55■□□□□ 0.56
LINGO3P0C6S8 AL121832.2-201ENST00000610979 668 ntBASIC18.55■□□□□ 0.56
LINGO3P0C6S8 AL356652.1-201ENST00000615962 565 ntBASIC18.55■□□□□ 0.56
LINGO3P0C6S8 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.55■□□□□ 0.56
LINGO3P0C6S8 AC084018.2-201ENST00000613093 2607 ntBASIC18.55■□□□□ 0.56
LINGO3P0C6S8 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINGO3P0C6S8 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINGO3P0C6S8 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LINGO3P0C6S8 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINGO3P0C6S8 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
LINGO3P0C6S8 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
LINGO3P0C6S8 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.54■□□□□ 0.56
LINGO3P0C6S8 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.54■□□□□ 0.56
LINGO3P0C6S8 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.54■□□□□ 0.56
LINGO3P0C6S8 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINGO3P0C6S8 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINGO3P0C6S8 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.54■□□□□ 0.56
LINGO3P0C6S8 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINGO3P0C6S8 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LINGO3P0C6S8 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINGO3P0C6S8 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.54■□□□□ 0.56
LINGO3P0C6S8 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.54■□□□□ 0.56
LINGO3P0C6S8 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.54■□□□□ 0.56
LINGO3P0C6S8 AC083906.2-201ENST00000511578 360 ntBASIC18.54■□□□□ 0.56
LINGO3P0C6S8 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.54■□□□□ 0.56
LINGO3P0C6S8 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LINGO3P0C6S8 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.54■□□□□ 0.56
LINGO3P0C6S8 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LINGO3P0C6S8 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINGO3P0C6S8 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINGO3P0C6S8 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
LINGO3P0C6S8 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINGO3P0C6S8 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINGO3P0C6S8 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINGO3P0C6S8 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINGO3P0C6S8 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LINGO3P0C6S8 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.53■□□□□ 0.56
LINGO3P0C6S8 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
LINGO3P0C6S8 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
LINGO3P0C6S8 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.53■□□□□ 0.56
LINGO3P0C6S8 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LINGO3P0C6S8 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LINGO3P0C6S8 AC046158.3-201ENST00000624947 2558 ntBASIC18.53■□□□□ 0.56
LINGO3P0C6S8 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
LINGO3P0C6S8 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.53■□□□□ 0.56
LINGO3P0C6S8 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.53■□□□□ 0.56
LINGO3P0C6S8 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LINGO3P0C6S8 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
LINGO3P0C6S8 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
LINGO3P0C6S8 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LINGO3P0C6S8 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.53■□□□□ 0.56
LINGO3P0C6S8 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
LINGO3P0C6S8 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.53■□□□□ 0.56
LINGO3P0C6S8 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
LINGO3P0C6S8 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LINGO3P0C6S8 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.53■□□□□ 0.56
LINGO3P0C6S8 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.53■□□□□ 0.56
LINGO3P0C6S8 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.53■□□□□ 0.56
LINGO3P0C6S8 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.53■□□□□ 0.56
LINGO3P0C6S8 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.53■□□□□ 0.56
LINGO3P0C6S8 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.53■□□□□ 0.56
LINGO3P0C6S8 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.53■□□□□ 0.56
LINGO3P0C6S8 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.53■□□□□ 0.56
LINGO3P0C6S8 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LINGO3P0C6S8 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.53■□□□□ 0.56
LINGO3P0C6S8 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.53■□□□□ 0.56
LINGO3P0C6S8 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.53■□□□□ 0.56
LINGO3P0C6S8 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.53■□□□□ 0.56
LINGO3P0C6S8 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
LINGO3P0C6S8 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LINGO3P0C6S8 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.53■□□□□ 0.56
LINGO3P0C6S8 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LINGO3P0C6S8 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LINGO3P0C6S8 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.52■□□□□ 0.56
LINGO3P0C6S8 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LINGO3P0C6S8 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LINGO3P0C6S8 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms