Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AL136038.3-201ENST00000561909 1096 ntBASIC19.41■□□□□ 0.7
RETP07949 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.41■□□□□ 0.7
RETP07949 AC008622.2-201ENST00000617006 1229 ntBASIC19.41■□□□□ 0.7
RETP07949 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.41■□□□□ 0.7
RETP07949 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RETP07949 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RETP07949 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RETP07949 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RETP07949 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RETP07949 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RETP07949 AL512408.1-201ENST00000569378 2000 ntBASIC19.41■□□□□ 0.7
RETP07949 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RETP07949 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RETP07949 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.4■□□□□ 0.7
RETP07949 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.4■□□□□ 0.7
RETP07949 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.4■□□□□ 0.7
RETP07949 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RETP07949 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RETP07949 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RETP07949 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.4■□□□□ 0.7
RETP07949 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.4■□□□□ 0.7
RETP07949 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.4■□□□□ 0.7
RETP07949 VENTXP5-201ENST00000523979 775 ntBASIC19.4■□□□□ 0.7
RETP07949 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RETP07949 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
RETP07949 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
RETP07949 AL023803.3-201ENST00000615559 522 ntBASIC19.4■□□□□ 0.7
RETP07949 KRT8P17-201ENST00000453110 1448 ntBASIC19.4■□□□□ 0.7
RETP07949 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RETP07949 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RETP07949 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
RETP07949 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RETP07949 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.4■□□□□ 0.7
RETP07949 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.4■□□□□ 0.7
RETP07949 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RETP07949 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RETP07949 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
RETP07949 FP700111.2-201ENST00000619190 1892 ntBASIC19.39■□□□□ 0.7
RETP07949 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RETP07949 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RETP07949 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RETP07949 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RETP07949 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.39■□□□□ 0.69
RETP07949 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RETP07949 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
RETP07949 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RETP07949 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RETP07949 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.39■□□□□ 0.69
RETP07949 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.39■□□□□ 0.69
RETP07949 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.39■□□□□ 0.69
RETP07949 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.39■□□□□ 0.69
RETP07949 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.39■□□□□ 0.69
RETP07949 PRSS44-201ENST00000515154 1146 ntBASIC19.39■□□□□ 0.69
RETP07949 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.39■□□□□ 0.69
RETP07949 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.39■□□□□ 0.69
RETP07949 AL441883.1-201ENST00000566170 1045 ntBASIC19.39■□□□□ 0.69
RETP07949 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
RETP07949 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.39■□□□□ 0.69
RETP07949 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
RETP07949 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RETP07949 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
RETP07949 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RETP07949 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RETP07949 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.39■□□□□ 0.69
RETP07949 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RETP07949 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.39■□□□□ 0.69
RETP07949 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RETP07949 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.39■□□□□ 0.69
RETP07949 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
RETP07949 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RETP07949 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.39■□□□□ 0.69
RETP07949 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RETP07949 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RETP07949 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.38■□□□□ 0.69
RETP07949 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.38■□□□□ 0.69
RETP07949 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RETP07949 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RETP07949 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RETP07949 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RETP07949 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.38■□□□□ 0.69
RETP07949 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RETP07949 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.38■□□□□ 0.69
RETP07949 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.38■□□□□ 0.69
RETP07949 AL353719.1-201ENST00000566847 864 ntBASIC19.38■□□□□ 0.69
RETP07949 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.38■□□□□ 0.69
RETP07949 PCDHAC2-203ENST00000615316 3011 ntBASIC19.38■□□□□ 0.69
RETP07949 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RETP07949 RNF165-205ENST00000588679 2904 ntBASIC19.38■□□□□ 0.69
RETP07949 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RETP07949 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RETP07949 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
RETP07949 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RETP07949 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RETP07949 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RETP07949 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
RETP07949 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RETP07949 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RETP07949 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RETP07949 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.37■□□□□ 0.69
RETP07949 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms