Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CTSDP07339 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC15.97■□□□□ 0.15
CTSDP07339 AC034268.1-201ENST00000441047 882 ntBASIC15.97■□□□□ 0.15
CTSDP07339 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC15.97■□□□□ 0.15
CTSDP07339 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC15.97■□□□□ 0.15
CTSDP07339 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC15.97■□□□□ 0.15
CTSDP07339 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CTSDP07339 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CTSDP07339 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CTSDP07339 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CTSDP07339 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.97■□□□□ 0.15
CTSDP07339 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC15.97■□□□□ 0.15
CTSDP07339 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.97■□□□□ 0.15
CTSDP07339 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CTSDP07339 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CTSDP07339 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CTSDP07339 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CTSDP07339 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CTSDP07339 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC15.96■□□□□ 0.15
CTSDP07339 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CTSDP07339 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CTSDP07339 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.96■□□□□ 0.15
CTSDP07339 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CTSDP07339 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.96■□□□□ 0.15
CTSDP07339 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.96■□□□□ 0.15
CTSDP07339 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CTSDP07339 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CTSDP07339 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CTSDP07339 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CTSDP07339 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CTSDP07339 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CTSDP07339 MIR935-201ENST00000401179 91 ntBASIC15.96■□□□□ 0.15
CTSDP07339 AC026271.2-201ENST00000428091 497 ntBASIC15.96■□□□□ 0.15
CTSDP07339 KRT18P11-201ENST00000435214 1283 ntBASIC15.96■□□□□ 0.15
CTSDP07339 HES2-205ENST00000487437 968 ntTSL 3 BASIC15.96■□□□□ 0.15
CTSDP07339 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC15.96■□□□□ 0.15
CTSDP07339 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC15.96■□□□□ 0.15
CTSDP07339 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC15.96■□□□□ 0.15
CTSDP07339 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC15.96■□□□□ 0.15
CTSDP07339 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CTSDP07339 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CTSDP07339 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CTSDP07339 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CTSDP07339 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.96■□□□□ 0.15
CTSDP07339 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CTSDP07339 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CTSDP07339 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC15.96■□□□□ 0.14
CTSDP07339 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CTSDP07339 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CTSDP07339 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC15.95■□□□□ 0.14
CTSDP07339 AC068338.2-201ENST00000563278 1430 ntBASIC15.95■□□□□ 0.14
CTSDP07339 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CTSDP07339 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CTSDP07339 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CTSDP07339 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CTSDP07339 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CTSDP07339 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC15.95■□□□□ 0.14
CTSDP07339 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CTSDP07339 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CTSDP07339 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC15.95■□□□□ 0.14
CTSDP07339 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CTSDP07339 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CTSDP07339 AL355472.2-201ENST00000422958 438 ntBASIC15.95■□□□□ 0.14
CTSDP07339 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CTSDP07339 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC15.95■□□□□ 0.14
CTSDP07339 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC15.95■□□□□ 0.14
CTSDP07339 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC15.95■□□□□ 0.14
CTSDP07339 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC15.95■□□□□ 0.14
CTSDP07339 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CTSDP07339 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CTSDP07339 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CTSDP07339 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CTSDP07339 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC15.95■□□□□ 0.14
CTSDP07339 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CTSDP07339 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CTSDP07339 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CTSDP07339 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CTSDP07339 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CTSDP07339 AC104417.2-201ENST00000562989 1793 ntBASIC15.95■□□□□ 0.14
CTSDP07339 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC15.95■□□□□ 0.14
CTSDP07339 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CTSDP07339 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CTSDP07339 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CTSDP07339 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CTSDP07339 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CTSDP07339 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CTSDP07339 SDHAP1-207ENST00000440850 2000 ntBASIC15.94■□□□□ 0.14
CTSDP07339 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CTSDP07339 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CTSDP07339 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
CTSDP07339 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CTSDP07339 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CTSDP07339 HACD1-201ENST00000326961 773 ntTSL 2 BASIC15.94■□□□□ 0.14
CTSDP07339 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CTSDP07339 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC15.94■□□□□ 0.14
CTSDP07339 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC15.94■□□□□ 0.14
CTSDP07339 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CTSDP07339 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CTSDP07339 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CTSDP07339 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms