Protein–RNA interactions for Protein: P04626

ERBB2, Receptor tyrosine-protein kinase erbB-2, humanhuman

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2P04626 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ERBB2P04626 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
ERBB2P04626 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.23■□□□□ 0.83
ERBB2P04626 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.23■□□□□ 0.83
ERBB2P04626 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ERBB2P04626 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.23■□□□□ 0.83
ERBB2P04626 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ERBB2P04626 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
ERBB2P04626 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
ERBB2P04626 AL161938.1-201ENST00000569833 2180 ntBASIC20.22■□□□□ 0.83
ERBB2P04626 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ERBB2P04626 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ERBB2P04626 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ERBB2P04626 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ERBB2P04626 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ERBB2P04626 AL135905.2-201ENST00000584934 1404 ntBASIC20.22■□□□□ 0.83
ERBB2P04626 AL049812.1-201ENST00000432563 2267 ntBASIC20.22■□□□□ 0.83
ERBB2P04626 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
ERBB2P04626 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.22■□□□□ 0.83
ERBB2P04626 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ERBB2P04626 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ERBB2P04626 AC113410.3-201ENST00000623366 203 ntBASIC20.22■□□□□ 0.83
ERBB2P04626 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.22■□□□□ 0.83
ERBB2P04626 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ERBB2P04626 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ERBB2P04626 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.22■□□□□ 0.83
ERBB2P04626 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ERBB2P04626 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.22■□□□□ 0.83
ERBB2P04626 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.22■□□□□ 0.83
ERBB2P04626 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ERBB2P04626 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ERBB2P04626 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ERBB2P04626 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
ERBB2P04626 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERBB2P04626 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ERBB2P04626 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERBB2P04626 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERBB2P04626 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERBB2P04626 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERBB2P04626 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERBB2P04626 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.21■□□□□ 0.83
ERBB2P04626 AC012618.2-201ENST00000428058 849 ntBASIC20.21■□□□□ 0.83
ERBB2P04626 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.21■□□□□ 0.83
ERBB2P04626 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ERBB2P04626 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.21■□□□□ 0.83
ERBB2P04626 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.21■□□□□ 0.83
ERBB2P04626 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.21■□□□□ 0.83
ERBB2P04626 AC233702.5-201ENST00000584107 538 ntBASIC20.21■□□□□ 0.83
ERBB2P04626 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERBB2P04626 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERBB2P04626 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERBB2P04626 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERBB2P04626 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.21■□□□□ 0.83
ERBB2P04626 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
ERBB2P04626 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ERBB2P04626 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERBB2P04626 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERBB2P04626 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.2■□□□□ 0.82
ERBB2P04626 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERBB2P04626 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERBB2P04626 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERBB2P04626 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERBB2P04626 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.2■□□□□ 0.82
ERBB2P04626 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERBB2P04626 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERBB2P04626 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
ERBB2P04626 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERBB2P04626 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.2■□□□□ 0.82
ERBB2P04626 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
ERBB2P04626 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
ERBB2P04626 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERBB2P04626 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.2■□□□□ 0.82
ERBB2P04626 AC008550.1-201ENST00000511500 884 ntBASIC20.2■□□□□ 0.82
ERBB2P04626 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.2■□□□□ 0.82
ERBB2P04626 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
ERBB2P04626 CD177P1-201ENST00000606252 935 ntBASIC20.2■□□□□ 0.82
ERBB2P04626 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.2■□□□□ 0.82
ERBB2P04626 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERBB2P04626 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.2■□□□□ 0.82
ERBB2P04626 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERBB2P04626 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
ERBB2P04626 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERBB2P04626 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
ERBB2P04626 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERBB2P04626 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERBB2P04626 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ERBB2P04626 RCC2P6-201ENST00000526625 1557 ntBASIC20.2■□□□□ 0.82
ERBB2P04626 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ERBB2P04626 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ERBB2P04626 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ERBB2P04626 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.19■□□□□ 0.82
ERBB2P04626 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ERBB2P04626 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.19■□□□□ 0.82
ERBB2P04626 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ERBB2P04626 AC087289.5-201ENST00000586076 3175 ntBASIC20.19■□□□□ 0.82
ERBB2P04626 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ERBB2P04626 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
ERBB2P04626 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ERBB2P04626 AP000974.1-201ENST00000623909 2387 ntBASIC20.19■□□□□ 0.82
ERBB2P04626 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms