Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHRNA1P02708 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHRNA1P02708 TSPY23P-201ENST00000440136 739 ntBASIC20.94■□□□□ 0.94
CHRNA1P02708 KRT18P56-201ENST00000507275 550 ntBASIC20.94■□□□□ 0.94
CHRNA1P02708 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
CHRNA1P02708 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.94■□□□□ 0.94
CHRNA1P02708 HYMAI.1-201ENST00000620949 238 ntBASIC20.94■□□□□ 0.94
CHRNA1P02708 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHRNA1P02708 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CHRNA1P02708 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.94■□□□□ 0.94
CHRNA1P02708 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.94■□□□□ 0.94
CHRNA1P02708 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHRNA1P02708 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.94■□□□□ 0.94
CHRNA1P02708 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHRNA1P02708 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHRNA1P02708 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHRNA1P02708 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.93■□□□□ 0.94
CHRNA1P02708 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.93■□□□□ 0.94
CHRNA1P02708 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHRNA1P02708 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHRNA1P02708 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHRNA1P02708 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHRNA1P02708 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHRNA1P02708 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CHRNA1P02708 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CHRNA1P02708 AP000523.1-201ENST00000398242 1049 ntBASIC20.93■□□□□ 0.94
CHRNA1P02708 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHRNA1P02708 AC112907.2-201ENST00000448639 330 ntBASIC20.93■□□□□ 0.94
CHRNA1P02708 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CHRNA1P02708 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.93■□□□□ 0.94
CHRNA1P02708 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.93■□□□□ 0.94
CHRNA1P02708 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.93■□□□□ 0.94
CHRNA1P02708 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
CHRNA1P02708 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.93■□□□□ 0.94
CHRNA1P02708 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.93■□□□□ 0.94
CHRNA1P02708 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHRNA1P02708 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHRNA1P02708 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHRNA1P02708 SDHAP1-207ENST00000440850 2000 ntBASIC20.93■□□□□ 0.94
CHRNA1P02708 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHRNA1P02708 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHRNA1P02708 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHRNA1P02708 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
CHRNA1P02708 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.93■□□□□ 0.94
CHRNA1P02708 LINC01006-201ENST00000333319 2292 ntBASIC20.93■□□□□ 0.94
CHRNA1P02708 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHRNA1P02708 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHRNA1P02708 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CHRNA1P02708 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CHRNA1P02708 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CHRNA1P02708 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHRNA1P02708 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.92■□□□□ 0.94
CHRNA1P02708 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHRNA1P02708 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.92■□□□□ 0.94
CHRNA1P02708 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.92■□□□□ 0.94
CHRNA1P02708 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.92■□□□□ 0.94
CHRNA1P02708 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.92■□□□□ 0.94
CHRNA1P02708 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.92■□□□□ 0.94
CHRNA1P02708 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CHRNA1P02708 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.92■□□□□ 0.94
CHRNA1P02708 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHRNA1P02708 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHRNA1P02708 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHRNA1P02708 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHRNA1P02708 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHRNA1P02708 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHRNA1P02708 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.92■□□□□ 0.94
CHRNA1P02708 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CHRNA1P02708 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.92■□□□□ 0.94
CHRNA1P02708 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.92■□□□□ 0.94
CHRNA1P02708 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.92■□□□□ 0.94
CHRNA1P02708 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHRNA1P02708 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHRNA1P02708 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHRNA1P02708 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHRNA1P02708 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
CHRNA1P02708 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CHRNA1P02708 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CHRNA1P02708 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHRNA1P02708 STARP1-201ENST00000397973 869 ntBASIC20.91■□□□□ 0.94
CHRNA1P02708 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CHRNA1P02708 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.91■□□□□ 0.94
CHRNA1P02708 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CHRNA1P02708 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
CHRNA1P02708 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.91■□□□□ 0.94
CHRNA1P02708 AL136038.3-201ENST00000561909 1096 ntBASIC20.91■□□□□ 0.94
CHRNA1P02708 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.91■□□□□ 0.94
CHRNA1P02708 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.91■□□□□ 0.94
CHRNA1P02708 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.91■□□□□ 0.94
CHRNA1P02708 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.91■□□□□ 0.94
CHRNA1P02708 AC083849.1-201ENST00000615227 514 ntBASIC20.91■□□□□ 0.94
CHRNA1P02708 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHRNA1P02708 CR769767.2-201ENST00000622735 460 ntBASIC20.91■□□□□ 0.94
CHRNA1P02708 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.91■□□□□ 0.94
CHRNA1P02708 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHRNA1P02708 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.91■□□□□ 0.94
CHRNA1P02708 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHRNA1P02708 AC112907.3-201ENST00000577781 2400 ntBASIC20.9■□□□□ 0.94
CHRNA1P02708 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHRNA1P02708 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms