Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
IFNA1P01562 LHPP-203ENST00000392757 840 ntTSL 3 BASIC15.23■□□□□ 0.03
IFNA1P01562 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IFNA1P01562 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC15.23■□□□□ 0.03
IFNA1P01562 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC15.23■□□□□ 0.03
IFNA1P01562 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
IFNA1P01562 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IFNA1P01562 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC15.23■□□□□ 0.03
IFNA1P01562 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
IFNA1P01562 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IFNA1P01562 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
IFNA1P01562 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC15.23■□□□□ 0.03
IFNA1P01562 ABALON-201ENST00000629058 1903 ntBASIC15.23■□□□□ 0.03
IFNA1P01562 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IFNA1P01562 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
IFNA1P01562 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IFNA1P01562 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC15.23■□□□□ 0.03
IFNA1P01562 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC15.23■□□□□ 0.03
IFNA1P01562 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.23■□□□□ 0.03
IFNA1P01562 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
IFNA1P01562 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
IFNA1P01562 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
IFNA1P01562 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IFNA1P01562 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IFNA1P01562 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IFNA1P01562 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IFNA1P01562 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IFNA1P01562 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
IFNA1P01562 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IFNA1P01562 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC15.22■□□□□ 0.03
IFNA1P01562 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
IFNA1P01562 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC15.22■□□□□ 0.03
IFNA1P01562 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC15.22■□□□□ 0.03
IFNA1P01562 IGHV3-19-201ENST00000521488 291 ntBASIC15.22■□□□□ 0.03
IFNA1P01562 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC15.22■□□□□ 0.03
IFNA1P01562 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
IFNA1P01562 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IFNA1P01562 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC15.22■□□□□ 0.03
IFNA1P01562 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
IFNA1P01562 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC15.22■□□□□ 0.03
IFNA1P01562 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
IFNA1P01562 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IFNA1P01562 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC15.22■□□□□ 0.03
IFNA1P01562 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
IFNA1P01562 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
IFNA1P01562 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC15.21■□□□□ 0.03
IFNA1P01562 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IFNA1P01562 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
IFNA1P01562 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
IFNA1P01562 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
IFNA1P01562 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IFNA1P01562 KRT8P17-201ENST00000453110 1448 ntBASIC15.21■□□□□ 0.03
IFNA1P01562 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC15.21■□□□□ 0.03
IFNA1P01562 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
IFNA1P01562 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
IFNA1P01562 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IFNA1P01562 BX842568.3-201ENST00000418104 571 ntBASIC15.21■□□□□ 0.03
IFNA1P01562 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC15.21■□□□□ 0.03
IFNA1P01562 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IFNA1P01562 AICDA-202ENST00000537228 667 ntTSL 5 BASIC15.21■□□□□ 0.03
IFNA1P01562 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC15.21■□□□□ 0.03
IFNA1P01562 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IFNA1P01562 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
IFNA1P01562 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
IFNA1P01562 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
IFNA1P01562 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.21■□□□□ 0.03
IFNA1P01562 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
IFNA1P01562 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
IFNA1P01562 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
IFNA1P01562 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
IFNA1P01562 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IFNA1P01562 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IFNA1P01562 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
IFNA1P01562 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC15.2■□□□□ 0.02
IFNA1P01562 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IFNA1P01562 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
IFNA1P01562 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
IFNA1P01562 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
IFNA1P01562 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
IFNA1P01562 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
IFNA1P01562 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
IFNA1P01562 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
IFNA1P01562 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IFNA1P01562 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
IFNA1P01562 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
IFNA1P01562 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
IFNA1P01562 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
IFNA1P01562 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
IFNA1P01562 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC15.2■□□□□ 0.02
IFNA1P01562 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC15.2■□□□□ 0.02
IFNA1P01562 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC15.2■□□□□ 0.02
IFNA1P01562 MIR3621-201ENST00000580529 85 ntBASIC15.2■□□□□ 0.02
IFNA1P01562 AC126544.1-201ENST00000580842 1059 ntBASIC15.2■□□□□ 0.02
IFNA1P01562 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
IFNA1P01562 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IFNA1P01562 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IFNA1P01562 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
IFNA1P01562 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IFNA1P01562 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC15.2■□□□□ 0.02
IFNA1P01562 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms