Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
ALDH1A1P00352 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ALDH1A1P00352 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ALDH1A1P00352 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.97■■□□□ 1.11
ALDH1A1P00352 FBXW4P1-201ENST00000426721 2239 ntBASIC21.97■■□□□ 1.11
ALDH1A1P00352 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ALDH1A1P00352 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
ALDH1A1P00352 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
ALDH1A1P00352 MRPL3P1-201ENST00000400109 1033 ntBASIC21.97■■□□□ 1.11
ALDH1A1P00352 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
ALDH1A1P00352 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC21.97■■□□□ 1.11
ALDH1A1P00352 AC104819.1-201ENST00000504587 486 ntBASIC21.97■■□□□ 1.11
ALDH1A1P00352 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ALDH1A1P00352 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
ALDH1A1P00352 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC21.97■■□□□ 1.11
ALDH1A1P00352 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
ALDH1A1P00352 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
ALDH1A1P00352 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
ALDH1A1P00352 HLA-A-201ENST00000376802 1334 ntBASIC21.97■■□□□ 1.11
ALDH1A1P00352 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
ALDH1A1P00352 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
ALDH1A1P00352 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.97■■□□□ 1.11
ALDH1A1P00352 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
ALDH1A1P00352 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ALDH1A1P00352 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
ALDH1A1P00352 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.96■■□□□ 1.11
ALDH1A1P00352 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC21.96■■□□□ 1.11
ALDH1A1P00352 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ALDH1A1P00352 FEM1AP1-201ENST00000431297 1995 ntBASIC21.96■■□□□ 1.11
ALDH1A1P00352 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ALDH1A1P00352 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
ALDH1A1P00352 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ALDH1A1P00352 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.96■■□□□ 1.11
ALDH1A1P00352 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
ALDH1A1P00352 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ALDH1A1P00352 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC21.96■■□□□ 1.11
ALDH1A1P00352 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ALDH1A1P00352 AL590627.1-203ENST00000421194 1026 ntBASIC21.96■■□□□ 1.11
ALDH1A1P00352 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC21.96■■□□□ 1.11
ALDH1A1P00352 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC21.96■■□□□ 1.11
ALDH1A1P00352 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC21.96■■□□□ 1.11
ALDH1A1P00352 AL136038.4-201ENST00000603606 1261 ntBASIC21.96■■□□□ 1.11
ALDH1A1P00352 AC079602.3-201ENST00000623931 403 ntBASIC21.96■■□□□ 1.11
ALDH1A1P00352 VPS51-217ENST00000639871 243 ntTSL 5 BASIC21.96■■□□□ 1.11
ALDH1A1P00352 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ALDH1A1P00352 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.96■■□□□ 1.11
ALDH1A1P00352 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ALDH1A1P00352 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ALDH1A1P00352 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
ALDH1A1P00352 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ALDH1A1P00352 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
ALDH1A1P00352 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
ALDH1A1P00352 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.95■■□□□ 1.1
ALDH1A1P00352 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.95■■□□□ 1.1
ALDH1A1P00352 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.95■■□□□ 1.1
ALDH1A1P00352 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
ALDH1A1P00352 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
ALDH1A1P00352 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.95■■□□□ 1.1
ALDH1A1P00352 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ALDH1A1P00352 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ALDH1A1P00352 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
ALDH1A1P00352 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ALDH1A1P00352 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ALDH1A1P00352 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
ALDH1A1P00352 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC21.95■■□□□ 1.1
ALDH1A1P00352 AC064862.7-201ENST00000604520 867 ntBASIC21.95■■□□□ 1.1
ALDH1A1P00352 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC21.95■■□□□ 1.1
ALDH1A1P00352 AL353801.3-201ENST00000609898 542 ntBASIC21.95■■□□□ 1.1
ALDH1A1P00352 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC21.95■■□□□ 1.1
ALDH1A1P00352 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ALDH1A1P00352 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.95■■□□□ 1.1
ALDH1A1P00352 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ALDH1A1P00352 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.95■■□□□ 1.1
ALDH1A1P00352 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ALDH1A1P00352 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.1
ALDH1A1P00352 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ALDH1A1P00352 SMG8-203ENST00000578922 2178 ntBASIC21.95■■□□□ 1.1
ALDH1A1P00352 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ALDH1A1P00352 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ALDH1A1P00352 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
ALDH1A1P00352 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ALDH1A1P00352 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
ALDH1A1P00352 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ALDH1A1P00352 BAALC-202ENST00000306391 243 ntTSL 5 BASIC21.94■■□□□ 1.1
ALDH1A1P00352 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ALDH1A1P00352 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ALDH1A1P00352 BAALC-204ENST00000330955 222 ntTSL 5 BASIC21.94■■□□□ 1.1
ALDH1A1P00352 DFFB-203ENST00000341385 572 ntTSL 5 BASIC21.94■■□□□ 1.1
ALDH1A1P00352 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ALDH1A1P00352 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC21.94■■□□□ 1.1
ALDH1A1P00352 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.94■■□□□ 1.1
ALDH1A1P00352 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ALDH1A1P00352 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
ALDH1A1P00352 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ALDH1A1P00352 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
ALDH1A1P00352 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ALDH1A1P00352 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.93■■□□□ 1.1
ALDH1A1P00352 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ALDH1A1P00352 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC21.93■■□□□ 1.1
ALDH1A1P00352 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms