Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
USH2AO75445 GAD2-202ENST00000376248 680 ntTSL 5 BASIC8.6□□□□□ -1.03
USH2AO75445 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC8.6□□□□□ -1.03
USH2AO75445 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC8.6□□□□□ -1.03
USH2AO75445 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC8.6□□□□□ -1.03
USH2AO75445 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC8.6□□□□□ -1.03
USH2AO75445 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
USH2AO75445 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC8.6□□□□□ -1.03
USH2AO75445 PRKN-208ENST00000610470 531 ntTSL 2 BASIC8.6□□□□□ -1.03
USH2AO75445 PRKN-209ENST00000612485 225 ntTSL 5 BASIC8.6□□□□□ -1.03
USH2AO75445 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
USH2AO75445 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC8.6□□□□□ -1.03
USH2AO75445 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
USH2AO75445 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
USH2AO75445 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
USH2AO75445 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
USH2AO75445 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
USH2AO75445 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
USH2AO75445 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC8.6□□□□□ -1.03
USH2AO75445 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
USH2AO75445 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC8.6□□□□□ -1.03
USH2AO75445 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
USH2AO75445 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
USH2AO75445 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
USH2AO75445 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC8.6□□□□□ -1.03
USH2AO75445 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
USH2AO75445 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
USH2AO75445 KRT18P28-201ENST00000453838 1332 ntBASIC8.6□□□□□ -1.03
USH2AO75445 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
USH2AO75445 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
USH2AO75445 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
USH2AO75445 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC8.6□□□□□ -1.03
USH2AO75445 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
USH2AO75445 DERL1-203ENST00000419562 918 ntTSL 2 BASIC8.59□□□□□ -1.03
USH2AO75445 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC8.59□□□□□ -1.03
USH2AO75445 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC8.59□□□□□ -1.03
USH2AO75445 NAA38-203ENST00000575071 553 ntTSL 2 BASIC8.59□□□□□ -1.03
USH2AO75445 LINC01711-201ENST00000598340 967 ntBASIC8.59□□□□□ -1.03
USH2AO75445 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC8.59□□□□□ -1.03
USH2AO75445 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
USH2AO75445 AL391807.1-203ENST00000604392 2365 ntBASIC8.59□□□□□ -1.03
USH2AO75445 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
USH2AO75445 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC8.59□□□□□ -1.03
USH2AO75445 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC8.59□□□□□ -1.03
USH2AO75445 AC005229.4-201ENST00000610085 2198 ntBASIC8.59□□□□□ -1.03
USH2AO75445 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
USH2AO75445 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC8.59□□□□□ -1.03
USH2AO75445 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
USH2AO75445 ILF2-202ENST00000368681 726 ntTSL 2 BASIC8.59□□□□□ -1.03
USH2AO75445 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
USH2AO75445 AC211486.1-202ENST00000416371 468 ntBASIC8.59□□□□□ -1.03
USH2AO75445 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC8.59□□□□□ -1.03
USH2AO75445 AC211476.1-201ENST00000503899 468 ntBASIC8.59□□□□□ -1.03
USH2AO75445 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC8.59□□□□□ -1.03
USH2AO75445 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC8.59□□□□□ -1.03
USH2AO75445 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC8.59□□□□□ -1.03
USH2AO75445 AL117328.2-201ENST00000624617 1940 ntBASIC8.59□□□□□ -1.03
USH2AO75445 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
USH2AO75445 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
USH2AO75445 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
USH2AO75445 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
USH2AO75445 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
USH2AO75445 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
USH2AO75445 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC8.59□□□□□ -1.03
USH2AO75445 LBH-203ENST00000404397 543 ntTSL 4 BASIC8.59□□□□□ -1.03
USH2AO75445 IMP4-203ENST00000409935 958 ntTSL 5 BASIC8.59□□□□□ -1.03
USH2AO75445 AC034105.1-201ENST00000563488 319 ntBASIC8.59□□□□□ -1.03
USH2AO75445 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC8.59□□□□□ -1.03
USH2AO75445 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC8.59□□□□□ -1.03
USH2AO75445 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
USH2AO75445 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
USH2AO75445 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
USH2AO75445 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
USH2AO75445 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
USH2AO75445 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
USH2AO75445 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC8.59□□□□□ -1.03
USH2AO75445 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
USH2AO75445 RNF126P1-202ENST00000569893 925 ntBASIC8.59□□□□□ -1.03
USH2AO75445 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC8.59□□□□□ -1.03
USH2AO75445 AC099336.1-202ENST00000602961 463 ntBASIC8.59□□□□□ -1.03
USH2AO75445 MIR1199-201ENST00000621445 119 ntBASIC8.59□□□□□ -1.03
USH2AO75445 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC8.59□□□□□ -1.03
USH2AO75445 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC8.59□□□□□ -1.03
USH2AO75445 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
USH2AO75445 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC8.59□□□□□ -1.04
USH2AO75445 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC8.59□□□□□ -1.04
USH2AO75445 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC8.58□□□□□ -1.04
USH2AO75445 BUB3-202ENST00000368859 667 ntTSL 3 BASIC8.58□□□□□ -1.04
USH2AO75445 METTL21AP1-201ENST00000438852 635 ntBASIC8.58□□□□□ -1.04
USH2AO75445 AP006288.1-201ENST00000446065 395 ntBASIC8.58□□□□□ -1.04
USH2AO75445 DNAJB3-202ENST00000449667 1266 ntBASIC8.58□□□□□ -1.04
USH2AO75445 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC8.58□□□□□ -1.04
USH2AO75445 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC8.58□□□□□ -1.04
USH2AO75445 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC8.58□□□□□ -1.04
USH2AO75445 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC8.58□□□□□ -1.04
USH2AO75445 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC8.58□□□□□ -1.04
USH2AO75445 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
USH2AO75445 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
USH2AO75445 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC8.58□□□□□ -1.04
USH2AO75445 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms