Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
BRD4O60885 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC26.63■■□□□ 1.85
BRD4O60885 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
BRD4O60885 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC26.63■■□□□ 1.85
BRD4O60885 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC26.63■■□□□ 1.85
BRD4O60885 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC26.63■■□□□ 1.85
BRD4O60885 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
BRD4O60885 ISCU-203ENST00000431221 799 ntTSL 2 BASIC26.63■■□□□ 1.85
BRD4O60885 TSPY17P-201ENST00000450329 467 ntBASIC26.63■■□□□ 1.85
BRD4O60885 GXYLT1P6-201ENST00000456472 1187 ntBASIC26.63■■□□□ 1.85
BRD4O60885 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC26.63■■□□□ 1.85
BRD4O60885 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC26.63■■□□□ 1.85
BRD4O60885 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC26.63■■□□□ 1.85
BRD4O60885 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
BRD4O60885 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
BRD4O60885 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
BRD4O60885 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC26.63■■□□□ 1.85
BRD4O60885 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC26.63■■□□□ 1.85
BRD4O60885 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC26.63■■□□□ 1.85
BRD4O60885 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
BRD4O60885 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
BRD4O60885 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
BRD4O60885 RNF152P1-201ENST00000397754 604 ntBASIC26.62■■□□□ 1.85
BRD4O60885 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
BRD4O60885 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC26.62■■□□□ 1.85
BRD4O60885 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC26.62■■□□□ 1.85
BRD4O60885 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC26.62■■□□□ 1.85
BRD4O60885 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC26.62■■□□□ 1.85
BRD4O60885 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC26.62■■□□□ 1.85
BRD4O60885 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
BRD4O60885 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
BRD4O60885 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
BRD4O60885 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC26.62■■□□□ 1.85
BRD4O60885 PWWP2AP1-201ENST00000429776 2273 ntBASIC26.62■■□□□ 1.85
BRD4O60885 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC26.62■■□□□ 1.85
BRD4O60885 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC26.62■■□□□ 1.85
BRD4O60885 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
BRD4O60885 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
BRD4O60885 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC26.61■■□□□ 1.85
BRD4O60885 AL512604.3-201ENST00000569583 964 ntBASIC26.61■■□□□ 1.85
BRD4O60885 AC091076.1-201ENST00000610741 619 ntBASIC26.61■■□□□ 1.85
BRD4O60885 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
BRD4O60885 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
BRD4O60885 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC26.61■■□□□ 1.85
BRD4O60885 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC26.61■■□□□ 1.85
BRD4O60885 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
BRD4O60885 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
BRD4O60885 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
BRD4O60885 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
BRD4O60885 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
BRD4O60885 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC26.6■■□□□ 1.85
BRD4O60885 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
BRD4O60885 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
BRD4O60885 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC26.6■■□□□ 1.85
BRD4O60885 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
BRD4O60885 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC26.6■■□□□ 1.85
BRD4O60885 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC26.6■■□□□ 1.85
BRD4O60885 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
BRD4O60885 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
BRD4O60885 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
BRD4O60885 PKD1P6-201ENST00000343738 4769 ntBASIC26.6■■□□□ 1.85
BRD4O60885 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC26.6■■□□□ 1.85
BRD4O60885 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
BRD4O60885 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
BRD4O60885 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
BRD4O60885 YBX1P2-201ENST00000489612 999 ntBASIC26.59■■□□□ 1.85
BRD4O60885 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
BRD4O60885 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC26.59■■□□□ 1.85
BRD4O60885 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC26.59■■□□□ 1.85
BRD4O60885 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
BRD4O60885 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC26.59■■□□□ 1.85
BRD4O60885 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC26.59■■□□□ 1.85
BRD4O60885 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
BRD4O60885 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
BRD4O60885 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
BRD4O60885 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
BRD4O60885 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
BRD4O60885 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
BRD4O60885 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
BRD4O60885 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
BRD4O60885 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC26.59■■□□□ 1.85
BRD4O60885 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
BRD4O60885 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
BRD4O60885 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
BRD4O60885 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC26.58■■□□□ 1.85
BRD4O60885 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
BRD4O60885 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC26.58■■□□□ 1.85
BRD4O60885 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC26.58■■□□□ 1.85
BRD4O60885 AL353719.1-201ENST00000566847 864 ntBASIC26.58■■□□□ 1.85
BRD4O60885 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
BRD4O60885 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
BRD4O60885 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC26.58■■□□□ 1.85
BRD4O60885 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC26.58■■□□□ 1.85
BRD4O60885 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
BRD4O60885 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
BRD4O60885 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
BRD4O60885 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.85
BRD4O60885 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC26.58■■□□□ 1.85
BRD4O60885 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
BRD4O60885 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms