Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LCMT2O60294 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LCMT2O60294 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LCMT2O60294 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LCMT2O60294 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.41■□□□□ 0.54
LCMT2O60294 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.41■□□□□ 0.54
LCMT2O60294 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LCMT2O60294 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LCMT2O60294 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LCMT2O60294 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
LCMT2O60294 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LCMT2O60294 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LCMT2O60294 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
LCMT2O60294 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
LCMT2O60294 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
LCMT2O60294 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.41■□□□□ 0.54
LCMT2O60294 AC008040.2-201ENST00000461049 708 ntBASIC18.41■□□□□ 0.54
LCMT2O60294 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LCMT2O60294 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LCMT2O60294 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
LCMT2O60294 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LCMT2O60294 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LCMT2O60294 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LCMT2O60294 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
LCMT2O60294 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LCMT2O60294 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LCMT2O60294 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.41■□□□□ 0.54
LCMT2O60294 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LCMT2O60294 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LCMT2O60294 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.4■□□□□ 0.54
LCMT2O60294 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LCMT2O60294 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LCMT2O60294 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
LCMT2O60294 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.4■□□□□ 0.54
LCMT2O60294 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.4■□□□□ 0.54
LCMT2O60294 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LCMT2O60294 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.4■□□□□ 0.54
LCMT2O60294 MESTP1-201ENST00000404287 994 ntBASIC18.4■□□□□ 0.54
LCMT2O60294 SNORA78-201ENST00000459373 127 ntBASIC18.4■□□□□ 0.54
LCMT2O60294 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LCMT2O60294 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.4■□□□□ 0.54
LCMT2O60294 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
LCMT2O60294 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.4■□□□□ 0.54
LCMT2O60294 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LCMT2O60294 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LCMT2O60294 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
LCMT2O60294 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
LCMT2O60294 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LCMT2O60294 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
LCMT2O60294 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LCMT2O60294 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LCMT2O60294 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.54
LCMT2O60294 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LCMT2O60294 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.54
LCMT2O60294 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LCMT2O60294 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
LCMT2O60294 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
LCMT2O60294 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.39■□□□□ 0.53
LCMT2O60294 RCC2P6-201ENST00000526625 1557 ntBASIC18.39■□□□□ 0.53
LCMT2O60294 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LCMT2O60294 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LCMT2O60294 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LCMT2O60294 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
LCMT2O60294 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
LCMT2O60294 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.39■□□□□ 0.53
LCMT2O60294 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
LCMT2O60294 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.39■□□□□ 0.53
LCMT2O60294 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.39■□□□□ 0.53
LCMT2O60294 AC091390.4-202ENST00000476426 537 ntBASIC18.39■□□□□ 0.53
LCMT2O60294 NUDT16P1-203ENST00000513809 620 ntBASIC18.39■□□□□ 0.53
LCMT2O60294 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.39■□□□□ 0.53
LCMT2O60294 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.39■□□□□ 0.53
LCMT2O60294 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.39■□□□□ 0.53
LCMT2O60294 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.39■□□□□ 0.53
LCMT2O60294 AC130371.2-201ENST00000619443 611 ntBASIC18.39■□□□□ 0.53
LCMT2O60294 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.39■□□□□ 0.53
LCMT2O60294 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LCMT2O60294 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LCMT2O60294 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LCMT2O60294 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LCMT2O60294 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LCMT2O60294 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.39■□□□□ 0.53
LCMT2O60294 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.39■□□□□ 0.53
LCMT2O60294 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LCMT2O60294 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LCMT2O60294 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.38■□□□□ 0.53
LCMT2O60294 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.38■□□□□ 0.53
LCMT2O60294 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.38■□□□□ 0.53
LCMT2O60294 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.38■□□□□ 0.53
LCMT2O60294 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LCMT2O60294 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
LCMT2O60294 AL596275.1-201ENST00000423464 877 ntBASIC18.38■□□□□ 0.53
LCMT2O60294 AC116562.2-201ENST00000507042 360 ntBASIC18.38■□□□□ 0.53
LCMT2O60294 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.38■□□□□ 0.53
LCMT2O60294 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.38■□□□□ 0.53
LCMT2O60294 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.38■□□□□ 0.53
LCMT2O60294 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.38■□□□□ 0.53
LCMT2O60294 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
LCMT2O60294 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.38■□□□□ 0.53
LCMT2O60294 AC026471.5-201ENST00000615068 467 ntBASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms