Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
VEGFDO43915 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.89■□□□□ 0.61
VEGFDO43915 MFAP1P1-201ENST00000442257 1255 ntBASIC18.89■□□□□ 0.61
VEGFDO43915 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.89■□□□□ 0.61
VEGFDO43915 CKBP1-201ENST00000565489 1086 ntBASIC18.89■□□□□ 0.61
VEGFDO43915 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.89■□□□□ 0.61
VEGFDO43915 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.89■□□□□ 0.61
VEGFDO43915 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.89■□□□□ 0.61
VEGFDO43915 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.89■□□□□ 0.61
VEGFDO43915 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VEGFDO43915 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.89■□□□□ 0.61
VEGFDO43915 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.89■□□□□ 0.61
VEGFDO43915 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VEGFDO43915 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.89■□□□□ 0.61
VEGFDO43915 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VEGFDO43915 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VEGFDO43915 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VEGFDO43915 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
VEGFDO43915 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
VEGFDO43915 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
VEGFDO43915 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
VEGFDO43915 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VEGFDO43915 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.88■□□□□ 0.61
VEGFDO43915 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
VEGFDO43915 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
VEGFDO43915 AC087499.1-201ENST00000418141 1075 ntBASIC18.88■□□□□ 0.61
VEGFDO43915 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.88■□□□□ 0.61
VEGFDO43915 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VEGFDO43915 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.88■□□□□ 0.61
VEGFDO43915 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VEGFDO43915 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
VEGFDO43915 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VEGFDO43915 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VEGFDO43915 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VEGFDO43915 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.88■□□□□ 0.61
VEGFDO43915 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VEGFDO43915 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
VEGFDO43915 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
VEGFDO43915 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
VEGFDO43915 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
VEGFDO43915 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
VEGFDO43915 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.87■□□□□ 0.61
VEGFDO43915 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VEGFDO43915 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
VEGFDO43915 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.87■□□□□ 0.61
VEGFDO43915 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.87■□□□□ 0.61
VEGFDO43915 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VEGFDO43915 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.87■□□□□ 0.61
VEGFDO43915 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.87■□□□□ 0.61
VEGFDO43915 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.87■□□□□ 0.61
VEGFDO43915 AL390955.1-201ENST00000428694 934 ntBASIC18.87■□□□□ 0.61
VEGFDO43915 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.87■□□□□ 0.61
VEGFDO43915 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.87■□□□□ 0.61
VEGFDO43915 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.87■□□□□ 0.61
VEGFDO43915 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.87■□□□□ 0.61
VEGFDO43915 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.87■□□□□ 0.61
VEGFDO43915 C2orf69P3-201ENST00000565542 1120 ntBASIC18.87■□□□□ 0.61
VEGFDO43915 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VEGFDO43915 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VEGFDO43915 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VEGFDO43915 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.86■□□□□ 0.61
VEGFDO43915 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
VEGFDO43915 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
VEGFDO43915 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VEGFDO43915 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
VEGFDO43915 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.86■□□□□ 0.61
VEGFDO43915 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VEGFDO43915 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VEGFDO43915 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VEGFDO43915 TSPY23P-201ENST00000440136 739 ntBASIC18.86■□□□□ 0.61
VEGFDO43915 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.86■□□□□ 0.61
VEGFDO43915 NAPSB-206ENST00000562112 1266 ntBASIC18.86■□□□□ 0.61
VEGFDO43915 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.86■□□□□ 0.61
VEGFDO43915 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VEGFDO43915 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VEGFDO43915 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VEGFDO43915 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
VEGFDO43915 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VEGFDO43915 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
VEGFDO43915 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VEGFDO43915 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
VEGFDO43915 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VEGFDO43915 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VEGFDO43915 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
VEGFDO43915 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.85■□□□□ 0.61
VEGFDO43915 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
VEGFDO43915 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.85■□□□□ 0.61
VEGFDO43915 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.85■□□□□ 0.61
VEGFDO43915 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VEGFDO43915 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
VEGFDO43915 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.85■□□□□ 0.61
VEGFDO43915 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VEGFDO43915 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.85■□□□□ 0.61
VEGFDO43915 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.85■□□□□ 0.61
VEGFDO43915 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.85■□□□□ 0.61
VEGFDO43915 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
VEGFDO43915 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
VEGFDO43915 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.85■□□□□ 0.61
VEGFDO43915 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VEGFDO43915 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms