Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
IDH3BO43837 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
IDH3BO43837 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.62■□□□□ 0.41
IDH3BO43837 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
IDH3BO43837 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.62■□□□□ 0.41
IDH3BO43837 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IDH3BO43837 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.62■□□□□ 0.41
IDH3BO43837 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
IDH3BO43837 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.62■□□□□ 0.41
IDH3BO43837 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.62■□□□□ 0.41
IDH3BO43837 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
IDH3BO43837 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.62■□□□□ 0.41
IDH3BO43837 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.62■□□□□ 0.41
IDH3BO43837 AC022517.1-201ENST00000592429 346 ntBASIC17.62■□□□□ 0.41
IDH3BO43837 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
IDH3BO43837 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.62■□□□□ 0.41
IDH3BO43837 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IDH3BO43837 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.62■□□□□ 0.41
IDH3BO43837 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.62■□□□□ 0.41
IDH3BO43837 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IDH3BO43837 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
IDH3BO43837 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
IDH3BO43837 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.62■□□□□ 0.41
IDH3BO43837 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.62■□□□□ 0.41
IDH3BO43837 AC018553.1-201ENST00000616682 1458 ntBASIC17.62■□□□□ 0.41
IDH3BO43837 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IDH3BO43837 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IDH3BO43837 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
IDH3BO43837 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IDH3BO43837 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IDH3BO43837 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.61■□□□□ 0.41
IDH3BO43837 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
IDH3BO43837 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
IDH3BO43837 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IDH3BO43837 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
IDH3BO43837 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IDH3BO43837 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
IDH3BO43837 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
IDH3BO43837 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
IDH3BO43837 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IDH3BO43837 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IDH3BO43837 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IDH3BO43837 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
IDH3BO43837 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
IDH3BO43837 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
IDH3BO43837 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IDH3BO43837 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.61■□□□□ 0.41
IDH3BO43837 AC018470.1-201ENST00000624790 3129 ntBASIC17.61■□□□□ 0.41
IDH3BO43837 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
IDH3BO43837 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
IDH3BO43837 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
IDH3BO43837 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
IDH3BO43837 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
IDH3BO43837 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
IDH3BO43837 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
IDH3BO43837 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
IDH3BO43837 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.61■□□□□ 0.41
IDH3BO43837 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IDH3BO43837 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.61■□□□□ 0.41
IDH3BO43837 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IDH3BO43837 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
IDH3BO43837 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
IDH3BO43837 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.61■□□□□ 0.41
IDH3BO43837 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
IDH3BO43837 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
IDH3BO43837 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.61■□□□□ 0.41
IDH3BO43837 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IDH3BO43837 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
IDH3BO43837 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.6■□□□□ 0.41
IDH3BO43837 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
IDH3BO43837 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.6■□□□□ 0.41
IDH3BO43837 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IDH3BO43837 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IDH3BO43837 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
IDH3BO43837 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IDH3BO43837 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.6■□□□□ 0.41
IDH3BO43837 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.6■□□□□ 0.41
IDH3BO43837 AC004911.1-201ENST00000416316 871 ntBASIC17.6■□□□□ 0.41
IDH3BO43837 AC073210.2-201ENST00000430369 194 ntBASIC17.6■□□□□ 0.41
IDH3BO43837 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IDH3BO43837 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
IDH3BO43837 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
IDH3BO43837 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IDH3BO43837 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.6■□□□□ 0.41
IDH3BO43837 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.6■□□□□ 0.41
IDH3BO43837 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
IDH3BO43837 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IDH3BO43837 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IDH3BO43837 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
IDH3BO43837 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
IDH3BO43837 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IDH3BO43837 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.6■□□□□ 0.41
IDH3BO43837 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.6■□□□□ 0.41
IDH3BO43837 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IDH3BO43837 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
IDH3BO43837 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
IDH3BO43837 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IDH3BO43837 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
IDH3BO43837 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.59■□□□□ 0.41
IDH3BO43837 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms