Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AIRN-201ENST00000601203 4374 ntBASIC20.58■□□□□ 0.89
HOXA2O43364 AC005332.1-201ENST00000577698 1310 ntBASIC20.58■□□□□ 0.89
HOXA2O43364 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.58■□□□□ 0.89
HOXA2O43364 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HOXA2O43364 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
HOXA2O43364 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
HOXA2O43364 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.58■□□□□ 0.89
HOXA2O43364 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HOXA2O43364 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.58■□□□□ 0.89
HOXA2O43364 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
HOXA2O43364 AC112907.2-201ENST00000448639 330 ntBASIC20.58■□□□□ 0.89
HOXA2O43364 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.58■□□□□ 0.89
HOXA2O43364 VENTXP5-201ENST00000523979 775 ntBASIC20.58■□□□□ 0.89
HOXA2O43364 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HOXA2O43364 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
HOXA2O43364 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.57■□□□□ 0.88
HOXA2O43364 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.57■□□□□ 0.88
HOXA2O43364 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HOXA2O43364 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.57■□□□□ 0.88
HOXA2O43364 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXA2O43364 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXA2O43364 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXA2O43364 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXA2O43364 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.57■□□□□ 0.88
HOXA2O43364 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXA2O43364 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HOXA2O43364 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.57■□□□□ 0.88
HOXA2O43364 TSPY23P-201ENST00000440136 739 ntBASIC20.57■□□□□ 0.88
HOXA2O43364 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
HOXA2O43364 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.57■□□□□ 0.88
HOXA2O43364 GCSHP2-201ENST00000560971 527 ntBASIC20.57■□□□□ 0.88
HOXA2O43364 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXA2O43364 AL391422.3-201ENST00000603791 2761 ntBASIC20.57■□□□□ 0.88
HOXA2O43364 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
HOXA2O43364 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXA2O43364 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HOXA2O43364 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
HOXA2O43364 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.57■□□□□ 0.88
HOXA2O43364 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA2O43364 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA2O43364 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA2O43364 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.56■□□□□ 0.88
HOXA2O43364 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.56■□□□□ 0.88
HOXA2O43364 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
HOXA2O43364 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.56■□□□□ 0.88
HOXA2O43364 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA2O43364 ZNF444P1-201ENST00000559497 298 ntBASIC20.56■□□□□ 0.88
HOXA2O43364 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.56■□□□□ 0.88
HOXA2O43364 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA2O43364 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA2O43364 CR769767.2-201ENST00000622735 460 ntBASIC20.56■□□□□ 0.88
HOXA2O43364 AC099778.1-201ENST00000568593 1911 ntBASIC20.56■□□□□ 0.88
HOXA2O43364 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
HOXA2O43364 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA2O43364 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA2O43364 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA2O43364 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA2O43364 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA2O43364 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA2O43364 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
HOXA2O43364 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.55■□□□□ 0.88
HOXA2O43364 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA2O43364 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA2O43364 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.55■□□□□ 0.88
HOXA2O43364 MIR4674-201ENST00000582457 87 ntBASIC20.55■□□□□ 0.88
HOXA2O43364 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.55■□□□□ 0.88
HOXA2O43364 AC069148.1-201ENST00000608741 768 ntBASIC20.55■□□□□ 0.88
HOXA2O43364 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.55■□□□□ 0.88
HOXA2O43364 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA2O43364 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA2O43364 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA2O43364 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA2O43364 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA2O43364 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA2O43364 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.54■□□□□ 0.88
HOXA2O43364 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA2O43364 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA2O43364 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA2O43364 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA2O43364 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
HOXA2O43364 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
HOXA2O43364 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.54■□□□□ 0.88
HOXA2O43364 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA2O43364 AC034232.1-201ENST00000506026 1064 ntBASIC20.54■□□□□ 0.88
HOXA2O43364 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.54■□□□□ 0.88
HOXA2O43364 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
HOXA2O43364 AC093458.2-201ENST00000623150 629 ntBASIC20.54■□□□□ 0.88
HOXA2O43364 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA2O43364 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA2O43364 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.54■□□□□ 0.88
HOXA2O43364 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA2O43364 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA2O43364 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.54■□□□□ 0.88
HOXA2O43364 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.54■□□□□ 0.88
HOXA2O43364 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA2O43364 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA2O43364 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.54■□□□□ 0.88
HOXA2O43364 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC20.54■□□□□ 0.88
HOXA2O43364 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.53■□□□□ 0.88
HOXA2O43364 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms