Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SOX1O00570 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SOX1O00570 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SOX1O00570 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SOX1O00570 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.49■□□□□ 0.87
SOX1O00570 AL391807.1-203ENST00000604392 2365 ntBASIC20.49■□□□□ 0.87
SOX1O00570 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.49■□□□□ 0.87
SOX1O00570 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SOX1O00570 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SOX1O00570 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SOX1O00570 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC20.49■□□□□ 0.87
SOX1O00570 NUS1P2-201ENST00000417358 873 ntBASIC20.49■□□□□ 0.87
SOX1O00570 WBP2-203ENST00000433525 928 ntTSL 2 BASIC20.49■□□□□ 0.87
SOX1O00570 AC112482.1-201ENST00000492080 688 ntBASIC20.49■□□□□ 0.87
SOX1O00570 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.49■□□□□ 0.87
SOX1O00570 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SOX1O00570 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SOX1O00570 Z83836.1-201ENST00000624605 1642 ntBASIC20.49■□□□□ 0.87
SOX1O00570 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SOX1O00570 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SOX1O00570 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.48■□□□□ 0.87
SOX1O00570 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SOX1O00570 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SOX1O00570 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SOX1O00570 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SOX1O00570 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SOX1O00570 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SOX1O00570 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SOX1O00570 LBH-203ENST00000404397 543 ntTSL 4 BASIC20.48■□□□□ 0.87
SOX1O00570 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.48■□□□□ 0.87
SOX1O00570 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SOX1O00570 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.48■□□□□ 0.87
SOX1O00570 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.48■□□□□ 0.87
SOX1O00570 AL157888.1-201ENST00000631930 593 ntBASIC20.48■□□□□ 0.87
SOX1O00570 AC134684.3-201ENST00000641758 218 ntBASIC20.48■□□□□ 0.87
SOX1O00570 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SOX1O00570 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.48■□□□□ 0.87
SOX1O00570 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.48■□□□□ 0.87
SOX1O00570 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.47■□□□□ 0.87
SOX1O00570 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SOX1O00570 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SOX1O00570 AL121603.2-201ENST00000557373 2117 ntBASIC20.47■□□□□ 0.87
SOX1O00570 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SOX1O00570 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SOX1O00570 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SOX1O00570 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.47■□□□□ 0.87
SOX1O00570 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.47■□□□□ 0.87
SOX1O00570 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
SOX1O00570 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SOX1O00570 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC20.47■□□□□ 0.87
SOX1O00570 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC20.47■□□□□ 0.87
SOX1O00570 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.47■□□□□ 0.87
SOX1O00570 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC20.47■□□□□ 0.87
SOX1O00570 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
SOX1O00570 Z69720.1-201ENST00000601483 472 ntBASIC20.47■□□□□ 0.87
SOX1O00570 AC083906.6-201ENST00000641366 219 ntBASIC20.47■□□□□ 0.87
SOX1O00570 AC079781.4-201ENST00000641908 219 ntBASIC20.47■□□□□ 0.87
SOX1O00570 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SOX1O00570 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SOX1O00570 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.47■□□□□ 0.87
SOX1O00570 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SOX1O00570 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
SOX1O00570 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SOX1O00570 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SOX1O00570 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SOX1O00570 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.46■□□□□ 0.87
SOX1O00570 SCARNA2-201ENST00000458748 420 ntBASIC20.46■□□□□ 0.87
SOX1O00570 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.46■□□□□ 0.87
SOX1O00570 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.46■□□□□ 0.87
SOX1O00570 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.46■□□□□ 0.87
SOX1O00570 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.46■□□□□ 0.87
SOX1O00570 AL356488.2-201ENST00000602755 427 ntBASIC20.46■□□□□ 0.87
SOX1O00570 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SOX1O00570 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.46■□□□□ 0.87
SOX1O00570 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
SOX1O00570 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SOX1O00570 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SOX1O00570 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SOX1O00570 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SOX1O00570 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.46■□□□□ 0.87
SOX1O00570 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SOX1O00570 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
SOX1O00570 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SOX1O00570 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SOX1O00570 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.45■□□□□ 0.86
SOX1O00570 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SOX1O00570 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SOX1O00570 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SOX1O00570 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SOX1O00570 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC20.45■□□□□ 0.86
SOX1O00570 AC018712.1-201ENST00000455767 687 ntBASIC20.45■□□□□ 0.86
SOX1O00570 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SOX1O00570 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
SOX1O00570 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
SOX1O00570 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.45■□□□□ 0.86
SOX1O00570 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.45■□□□□ 0.86
SOX1O00570 AC090616.6-201ENST00000582640 721 ntBASIC20.45■□□□□ 0.86
SOX1O00570 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.45■□□□□ 0.86
SOX1O00570 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.45■□□□□ 0.86
SOX1O00570 IGHV3-41-201ENST00000613121 348 ntBASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms